(not at the head of any monitored branch or PR)
2022-07-26 15:58.08: New job: test cviode.0.0.3 with ounit2.2.2.0, using opam dev
                              from https://github.com/ocaml/opam-repository.git#refs/pull/21354/head (10b49fadb0efcff442ed8cae85f7cc119fe28629)
                              on debian-11-ocaml-4.14/amd64

To reproduce locally:

git clone --recursive "https://github.com/ocaml/opam-repository.git" && cd "opam-repository" && git fetch origin "refs/pull/21354/head" && git reset --hard 10b49fad
git fetch origin master
git merge 42e749bdca1e36a9f7bbef60b3507d34c6c57fa3
cat > ../Dockerfile <<'END-OF-DOCKERFILE'
FROM ocaml/opam:debian-11-ocaml-4.14@sha256:1461d919411f5999f6d7ffd573b9b5385cda91accf83d3866b26097e791220be
USER 1000:1000
WORKDIR /home/opam
RUN for pkg in $(opam pin list --short); do opam pin remove "$pkg"; done
RUN opam repository remove -a multicore || true
RUN sudo ln -f /usr/bin/opam-dev /usr/bin/opam
RUN opam init --reinit -ni
ENV OPAMDOWNLOADJOBS="1"
ENV OPAMERRLOGLEN="0"
ENV OPAMSOLVERTIMEOUT="500"
ENV OPAMPRECISETRACKING="1"
RUN rm -rf opam-repository/
COPY --chown=1000:1000 . opam-repository/
RUN opam repository set-url --strict default opam-repository/
RUN opam pin add -k version -yn ounit2.2.2.0 2.2.0
RUN opam update --depexts
RUN opam remove ounit2.2.2.0 && opam install --deps-only ounit2.2.2.0 && opam install -v ounit2.2.2.0; \
    res=$?; \
    test "$res" != 31 && exit "$res"; \
    export OPAMCLI=2.0; \
    build_dir=$(opam var prefix)/.opam-switch/build; \
    failed=$(ls "$build_dir"); \
    for pkg in $failed; do \
    if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-11\""; then \
    echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
    fi; \
    done; \
    exit 1
RUN opam update --depexts
RUN opam remove cviode.0.0.3 && opam install --deps-only cviode.0.0.3 && opam install -v cviode.0.0.3; \
    res=$?; \
    test "$res" != 31 && exit "$res"; \
    export OPAMCLI=2.0; \
    build_dir=$(opam var prefix)/.opam-switch/build; \
    failed=$(ls "$build_dir"); \
    for pkg in $failed; do \
    if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-11\""; then \
    echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
    fi; \
    done; \
    exit 1
RUN opam update --depexts
RUN opam remove cviode.0.0.3 && opam install --deps-only --with-test cviode.0.0.3 && opam install -v --with-test cviode.0.0.3; \
    res=$?; \
    test "$res" != 31 && exit "$res"; \
    export OPAMCLI=2.0; \
    build_dir=$(opam var prefix)/.opam-switch/build; \
    failed=$(ls "$build_dir"); \
    for pkg in $failed; do \
    if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-11\""; then \
    echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
    fi; \
    done; \
    exit 1

END-OF-DOCKERFILE
docker build -f ../Dockerfile .

2022-07-26 15:58.08: Using cache hint "ocaml/opam:debian-11-ocaml-4.14@sha256:1461d919411f5999f6d7ffd573b9b5385cda91accf83d3866b26097e791220be-ounit2.2.2.0-cviode.0.0.3-10b49fadb0efcff442ed8cae85f7cc119fe28629"
2022-07-26 15:58.08: Using OBuilder spec:
((from ocaml/opam:debian-11-ocaml-4.14@sha256:1461d919411f5999f6d7ffd573b9b5385cda91accf83d3866b26097e791220be)
 (user (uid 1000) (gid 1000))
 (workdir /home/opam)
 (run (shell "for pkg in $(opam pin list --short); do opam pin remove \"$pkg\"; done"))
 (run (shell "opam repository remove -a multicore || true"))
 (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
 (run (shell "opam init --reinit --config .opamrc-sandbox -ni"))
 (env OPAMDOWNLOADJOBS 1)
 (env OPAMERRLOGLEN 0)
 (env OPAMSOLVERTIMEOUT 500)
 (env OPAMPRECISETRACKING 1)
 (run (shell "rm -rf opam-repository/"))
 (copy (src .) (dst opam-repository/))
 (run (shell "opam repository set-url --strict default opam-repository/"))
 (run (shell "opam pin add -k version -yn ounit2.2.2.0 2.2.0"))
 (run (network host)
      (shell "opam update --depexts"))
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell  "opam remove ounit2.2.2.0 && opam install --deps-only ounit2.2.2.0 && opam install -v ounit2.2.2.0;\
             \n        res=$?;\
             \n        test \"$res\" != 31 && exit \"$res\";\
             \n        export OPAMCLI=2.0;\
             \n        build_dir=$(opam var prefix)/.opam-switch/build;\
             \n        failed=$(ls \"$build_dir\");\
             \n        for pkg in $failed; do\
             \n          if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-11\\\"\"; then\
             \n            echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
             \n          fi;\
             \n        done;\
             \n        exit 1"))
 (run (network host)
      (shell "opam update --depexts"))
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell  "opam remove cviode.0.0.3 && opam install --deps-only cviode.0.0.3 && opam install -v cviode.0.0.3;\
             \n        res=$?;\
             \n        test \"$res\" != 31 && exit \"$res\";\
             \n        export OPAMCLI=2.0;\
             \n        build_dir=$(opam var prefix)/.opam-switch/build;\
             \n        failed=$(ls \"$build_dir\");\
             \n        for pkg in $failed; do\
             \n          if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-11\\\"\"; then\
             \n            echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
             \n          fi;\
             \n        done;\
             \n        exit 1"))
 (run (network host)
      (shell "opam update --depexts"))
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell  "opam remove cviode.0.0.3 && opam install --deps-only --with-test cviode.0.0.3 && opam install -v --with-test cviode.0.0.3;\
             \n        res=$?;\
             \n        test \"$res\" != 31 && exit \"$res\";\
             \n        export OPAMCLI=2.0;\
             \n        build_dir=$(opam var prefix)/.opam-switch/build;\
             \n        failed=$(ls \"$build_dir\");\
             \n        for pkg in $failed; do\
             \n          if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-11\\\"\"; then\
             \n            echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
             \n          fi;\
             \n        done;\
             \n        exit 1"))
)

2022-07-26 15:58.08: Waiting for resource in pool OCluster
2022-07-27 05:15.58: Waiting for worker...
2022-07-27 05:18.06: Got resource from pool OCluster
Building on pima.ocamllabs.io
All commits already cached
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HEAD is now at 42e749bdca Merge pull request #21885 from kit-ty-kate/fix-123
Merge made by the 'ort' strategy.
Auto packing the repository in the background for optimum performance.
See "git help gc" for manual housekeeping.
warning: The last gc run reported the following. Please correct the root cause
and remove .git/gc.log
Automatic cleanup will not be performed until the file is removed.

warning: There are too many unreachable loose objects; run 'git prune' to remove them.

 packages/ounit2/ounit2.2.2.0/opam | 3 +++
 packages/ounit2/ounit2.2.2.1/opam | 3 +++
 packages/ounit2/ounit2.2.2.2/opam | 3 +++
 packages/ounit2/ounit2.2.2.3/opam | 3 +++
 packages/ounit2/ounit2.2.2.4/opam | 3 +++
 packages/ounit2/ounit2.2.2.5/opam | 3 +++
 packages/ounit2/ounit2.2.2.6/opam | 3 +++
 7 files changed, 21 insertions(+)

(from ocaml/opam:debian-11-ocaml-4.14@sha256:1461d919411f5999f6d7ffd573b9b5385cda91accf83d3866b26097e791220be)
2022-07-27 05:21.55 ---> using "d837bbe1b6e58c32e942b55a1eb695ef30d2cac63c8a5d708beb3548d17192b4" from cache

/: (user (uid 1000) (gid 1000))

/: (workdir /home/opam)

/home/opam: (run (shell "for pkg in $(opam pin list --short); do opam pin remove \"$pkg\"; done"))
Ok, ocaml-base-compiler is no longer pinned to https://github.com/ocaml/ocaml/archive/4.14.0.tar.gz (version 4.14.0)
No package build needed.
Nothing to do.
# Run eval $(opam env) to update the current shell environment
2022-07-27 05:21.55 ---> using "543d29c04ee698e03faf7cfdc4bb3cf9e04a80ab924d981f1055393f1479d117" from cache

/home/opam: (run (shell "opam repository remove -a multicore || true"))
[WARNING] No configured repositories by these names found: multicore
2022-07-27 05:21.55 ---> using "e8a5c58b05459f7be98d7b03e29623d3a05b15b34833b50ebffb60eff7871cde" from cache

/home/opam: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
2022-07-27 05:21.55 ---> using "4687a20afa7557b4b2498b537430ed75c7b51cd6cad60d9c4757ff852befb1a7" from cache

/home/opam: (run (shell "opam init --reinit --config .opamrc-sandbox -ni"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
  - you won't be able to use mercurial repositories unless you install the hg command on your system.
  - you won't be able to use darcs repositories unless you install the darcs command on your system.

Continue? [y/n] y
This development version of opam requires an update to the layout of /home/opam/.opam from version 2.0 to version 2.1, which can't be reverted.
You may want to back it up before going further.

Format upgrade done.

<><> Updating repositories ><><><><><><><><><><><><><><><><><><><><><><><><><><>
[default] synchronised from file:///home/opam/opam-repository
2022-07-27 05:21.55 ---> using "87c4051d859f505ce794fbdc2ed87105744babed536dd4b09731a9b1e22fd3d4" from cache

/home/opam: (env OPAMDOWNLOADJOBS 1)

/home/opam: (env OPAMERRLOGLEN 0)

/home/opam: (env OPAMSOLVERTIMEOUT 500)

/home/opam: (env OPAMPRECISETRACKING 1)

/home/opam: (run (shell "rm -rf opam-repository/"))
2022-07-27 05:21.55 ---> using "96a067e6b08152c0f77ff1628817c13e12ac3db1ba1ac882a90278edcbb3d011" from cache

/home/opam: (copy (src .) (dst opam-repository/))
2022-07-27 05:21.57 ---> using "5ce106567f73501cd746c3358ba50b49e5b3ad28d47e7894c1f65b44fcda87e7" from cache

/home/opam: (run (shell "opam repository set-url --strict default opam-repository/"))
[default] Initialised
2022-07-27 05:21.57 ---> using "0981e55d831537155c9e161d0ab37d0aeee18cf4c3d1dbad8143304b4c508a5d" from cache

/home/opam: (run (shell "opam pin add -k version -yn ounit2.2.2.0 2.2.0"))
ounit2 is now pinned to version 2.2.0
2022-07-27 05:21.57 ---> using "a5b811fe2c6ab2fd90efb98285ea9db0346a5de8dadc9481e3cd36fb68f11371" from cache

/home/opam: (run (network host)
                 (shell "opam update --depexts"))
+ /usr/bin/sudo "apt-get" "update"
- Hit:1 http://deb.debian.org/debian bullseye InRelease
- Get:2 http://deb.debian.org/debian-security bullseye-security InRelease [48.4 kB]
- Get:3 http://deb.debian.org/debian bullseye-updates InRelease [44.1 kB]
- Get:4 http://deb.debian.org/debian-security bullseye-security/main amd64 Packages [168 kB]
- Fetched 261 kB in 1s (451 kB/s)
- Reading package lists...
- 
2022-07-27 05:21.57 ---> using "db2d7bb6f3a492dbe20e0d4ddb4733d768da5e64ce8f97c3cbc89325acd13b48" from cache

/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
                 (network host)
                 (shell  "opam remove ounit2.2.2.0 && opam install --deps-only ounit2.2.2.0 && opam install -v ounit2.2.2.0;\
                        \n        res=$?;\
                        \n        test \"$res\" != 31 && exit \"$res\";\
                        \n        export OPAMCLI=2.0;\
                        \n        build_dir=$(opam var prefix)/.opam-switch/build;\
                        \n        failed=$(ls \"$build_dir\");\
                        \n        for pkg in $failed; do\
                        \n          if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-11\\\"\"; then\
                        \n            echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
                        \n          fi;\
                        \n        done;\
                        \n        exit 1"))
[NOTE] ounit2.2.2.0 is not installed.

Nothing to do.
The following actions will be performed:
=== install 4 packages
  - install base-bytes   base  [required by ounit2]
  - install dune         3.4.1 [required by ounit2]
  - install ocamlfind    1.9.5 [required by base-bytes]
  - install stdlib-shims 0.3.0 [required by ounit2]

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved dune.3.4.1  (cached)
-> retrieved ocamlfind.1.9.5  (cached)
-> retrieved stdlib-shims.0.3.0  (cached)
-> installed ocamlfind.1.9.5
-> installed base-bytes.base
-> installed dune.3.4.1
-> installed stdlib-shims.0.3.0
Done.
# Run eval $(opam env) to update the current shell environment
The following actions will be performed:
=== install 1 package
  - install ounit2 2.2.0 (pinned)

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing  1/3:
-> retrieved ounit2.2.2.0  (cached)
Processing  2/3: [ounit2: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "ounit2" "-j" "31" (CWD=/home/opam/.opam/4.14/.opam-switch/build/ounit2.2.2.0)
- (cd _build/default && /home/opam/.opam/4.14/bin/ocamlc.opt -w -40 -g -bin-annot -I src/lib/ounit2/advanced/.oUnitAdvanced.objs/byte -I /home/opam/.opam/4.14/lib/stdlib-shims -no-alias-deps -o src/lib/ounit2/advanced/.oUnitAdvanced.objs/byte/oUnitAssert.cmo -c -impl src/lib/ounit2/advanced/oUnitAssert.ml)
- File "src/lib/ounit2/advanced/oUnitAssert.ml", line 130, characters 13-27:
- 130 |     ?(sinput=Stream.of_list [])
-                    ^^^^^^^^^^^^^^
- Alert deprecated: module Stdlib.Stream
- Use the camlp-streams library instead.
- File "src/lib/ounit2/advanced/oUnitAssert.ml", line 270, characters 13-24:
- 270 |              Stream.iter
-                    ^^^^^^^^^^^
- Alert deprecated: module Stdlib.Stream
- Use the camlp-streams library instead.
- File "src/lib/ounit2/advanced/oUnitAssert.ml", line 315, characters 26-43:
- 315 |                  foutput (Stream.of_channel chn)
-                                 ^^^^^^^^^^^^^^^^^
- Alert deprecated: module Stdlib.Stream
- Use the camlp-streams library instead.
- (cd _build/default && /home/opam/.opam/4.14/bin/ocamlopt.opt -w -40 -g -I src/lib/ounit2/advanced/.oUnitAdvanced.objs/byte -I src/lib/ounit2/advanced/.oUnitAdvanced.objs/native -I /home/opam/.opam/4.14/lib/stdlib-shims -intf-suffix .ml -no-alias-deps -o src/lib/ounit2/advanced/.oUnitAdvanced.objs/native/oUnitAssert.cmx -c -impl src/lib/ounit2/advanced/oUnitAssert.ml)
- File "src/lib/ounit2/advanced/oUnitAssert.ml", line 130, characters 13-27:
- 130 |     ?(sinput=Stream.of_list [])
-                    ^^^^^^^^^^^^^^
- Alert deprecated: module Stdlib.Stream
- Use the camlp-streams library instead.
- File "src/lib/ounit2/advanced/oUnitAssert.ml", line 270, characters 13-24:
- 270 |              Stream.iter
-                    ^^^^^^^^^^^
- Alert deprecated: module Stdlib.Stream
- Use the camlp-streams library instead.
- File "src/lib/ounit2/advanced/oUnitAssert.ml", line 315, characters 26-43:
- 315 |                  foutput (Stream.of_channel chn)
-                                 ^^^^^^^^^^^^^^^^^
- Alert deprecated: module Stdlib.Stream
- Use the camlp-streams library instead.
- (cd _build/default && /home/opam/.opam/4.14/bin/ocamlc.opt -w -40 -g -bin-annot -I src/lib/ounit2/.oUnit.objs/byte -I /home/opam/.opam/4.14/lib/stdlib-shims -I src/lib/ounit2/advanced/.oUnitAdvanced.objs/byte -no-alias-deps -o src/lib/ounit2/.oUnit.objs/byte/oUnit2.cmi -c -intf src/lib/ounit2/oUnit2.mli)
- File "src/lib/ounit2/oUnit2.mli", line 88, characters 17-25:
- 88 |     ?sinput:char Stream.t ->
-                       ^^^^^^^^
- Alert deprecated: module Stdlib.Stream
- Use the camlp-streams library instead.
- File "src/lib/ounit2/oUnit2.mli", line 89, characters 19-27:
- 89 |     ?foutput:(char Stream.t -> unit) ->
-                         ^^^^^^^^
- Alert deprecated: module Stdlib.Stream
- Use the camlp-streams library instead.
- (cd _build/default && /home/opam/.opam/4.14/bin/ocamlc.opt -w -40 -g -bin-annot -I src/lib/ounit2/.oUnit.objs/byte -I /home/opam/.opam/4.14/lib/stdlib-shims -I src/lib/ounit2/advanced/.oUnitAdvanced.objs/byte -no-alias-deps -o src/lib/ounit2/.oUnit.objs/byte/oUnit.cmi -c -intf src/lib/ounit2/oUnit.mli)
- File "src/lib/ounit2/oUnit.mli", line 80, characters 17-25:
- 80 |     ?sinput:char Stream.t ->
-                       ^^^^^^^^
- Alert deprecated: module Stdlib.Stream
- Use the camlp-streams library instead.
- File "src/lib/ounit2/oUnit.mli", line 81, characters 19-27:
- 81 |     ?foutput:(char Stream.t -> unit) ->
-                         ^^^^^^^^
- Alert deprecated: module Stdlib.Stream
- Use the camlp-streams library instead.
- (cd _build/default && /home/opam/.opam/4.14/bin/ocamlc.opt -w -40 -g -bin-annot -I src/lib/ounit2/threads/.oUnitThreads.objs/byte -I src/lib/ounit2/threads/.oUnitThreads.objs/public_cmi -I /home/opam/.opam/4.14/lib/ocaml/threads -I /home/opam/.opam/4.14/lib/stdlib-shims -I src/lib/ounit2/.oUnit.objs/byte -I src/lib/ounit2/advanced/.oUnitAdvanced.objs/byte -no-alias-deps -open OUnitThreads__ -o src/lib/ounit2/threads/.oUnitThreads.objs/byte/oUnitThreads__OUnitRunnerThreads.cmo -c -impl src/lib/ounit2/threads/oUnitRunnerThreads.ml)
- File "src/lib/ounit2/threads/oUnitRunnerThreads.ml", line 147, characters 8-19:
- 147 |         Thread.kill thread;
-               ^^^^^^^^^^^
- Alert deprecated: Thread.kill
- Not implemented, do not use
- (cd _build/default && /home/opam/.opam/4.14/bin/ocamlopt.opt -w -40 -g -I src/lib/ounit2/threads/.oUnitThreads.objs/byte -I src/lib/ounit2/threads/.oUnitThreads.objs/native -I src/lib/ounit2/threads/.oUnitThreads.objs/public_cmi -I /home/opam/.opam/4.14/lib/ocaml/threads -I /home/opam/.opam/4.14/lib/stdlib-shims -I src/lib/ounit2/.oUnit.objs/byte -I src/lib/ounit2/.oUnit.objs/native -I src/lib/ounit2/advanced/.oUnitAdvanced.objs/byte -I src/lib/ounit2/advanced/.oUnitAdvanced.objs/native -intf-suffix .ml -no-alias-deps -open OUnitThreads__ -o src/lib/ounit2/threads/.oUnitThreads.objs/native/oUnitThreads__OUnitRunnerThreads.cmx -c -impl src/lib/ounit2/threads/oUnitRunnerThreads.ml)
- File "src/lib/ounit2/threads/oUnitRunnerThreads.ml", line 147, characters 8-19:
- 147 |         Thread.kill thread;
-               ^^^^^^^^^^^
- Alert deprecated: Thread.kill
- Not implemented, do not use
-> compiled  ounit2.2.2.0
-> installed ounit2.2.2.0
Done.
# Run eval $(opam env) to update the current shell environment
2022-07-27 05:21.57 ---> using "549816a256be73d9a20d8aac9e10b779e4fdffd8e09de149b8d5e327ac84c14f" from cache

/home/opam: (run (network host)
                 (shell "opam update --depexts"))
+ /usr/bin/sudo "apt-get" "update"
- Hit:1 http://deb.debian.org/debian bullseye InRelease
- Hit:2 http://deb.debian.org/debian-security bullseye-security InRelease
- Hit:3 http://deb.debian.org/debian bullseye-updates InRelease
- Reading package lists...
- 
2022-07-27 05:21.57 ---> using "ed77e423a302c60a5809ee2b791a97889b346ae238a3ae55d40f898cb095304c" from cache

/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
                 (network host)
                 (shell  "opam remove cviode.0.0.3 && opam install --deps-only cviode.0.0.3 && opam install -v cviode.0.0.3;\
                        \n        res=$?;\
                        \n        test \"$res\" != 31 && exit \"$res\";\
                        \n        export OPAMCLI=2.0;\
                        \n        build_dir=$(opam var prefix)/.opam-switch/build;\
                        \n        failed=$(ls \"$build_dir\");\
                        \n        for pkg in $failed; do\
                        \n          if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-11\\\"\"; then\
                        \n            echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
                        \n          fi;\
                        \n        done;\
                        \n        exit 1"))
[NOTE] cviode.0.0.3 is not installed.

Nothing to do.
The following actions will be performed:
=== install 13 packages
  - install base              v0.15.0 [required by owl]
  - install conf-openblas     0.2.1   [required by owl]
  - install conf-pkg-config   2       [required by ctypes]
  - install csexp             1.5.1   [required by dune-configurator]
  - install ctypes            0.16.0  [required by owl]
  - install dune-configurator 3.4.1   [required by owl]
  - install eigen             0.3.3   [required by owl]
  - install integers          0.7.0   [required by ctypes]
  - install owl               0.5.0   [required by cviode]
  - install owl-base          0.5.0   [required by owl]
  - install owl-ode           0.0.8   [required by cviode]
  - install sexplib0          v0.15.1 [required by base]
  - install stdio             v0.15.0 [required by owl]

The following system packages will first need to be installed:
    liblapacke-dev libopenblas-dev pkg-config

<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>

opam believes some required external dependencies are missing. opam can:
> 1. Run apt-get to install them (may need root/sudo access)
  2. Display the recommended apt-get command and wait while you run it manually (e.g. in another terminal)
  3. Attempt installation anyway, and permanently register that this external dependency is present, but not detectable
  4. Abort the installation

[1/2/3/4] 1
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "liblapacke-dev" "libopenblas-dev" "pkg-config"
- debconf: delaying package configuration, since apt-utils is not installed
- Selecting previously unselected package libgfortran5:amd64.
- (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 18331 files and directories currently installed.)
- Preparing to unpack .../00-libgfortran5_10.2.1-6_amd64.deb ...
- Unpacking libgfortran5:amd64 (10.2.1-6) ...
- Selecting previously unselected package libglib2.0-0:amd64.
- Preparing to unpack .../01-libglib2.0-0_2.66.8-1_amd64.deb ...
- Unpacking libglib2.0-0:amd64 (2.66.8-1) ...
- Selecting previously unselected package libglib2.0-data.
- Preparing to unpack .../02-libglib2.0-data_2.66.8-1_all.deb ...
- Unpacking libglib2.0-data (2.66.8-1) ...
- Selecting previously unselected package libicu67:amd64.
- Preparing to unpack .../03-libicu67_67.1-7_amd64.deb ...
- Unpacking libicu67:amd64 (67.1-7) ...
- Selecting previously unselected package libopenblas0-pthread:amd64.
- Preparing to unpack .../04-libopenblas0-pthread_0.3.13+ds-3_amd64.deb ...
- Unpacking libopenblas0-pthread:amd64 (0.3.13+ds-3) ...
- Selecting previously unselected package libtmglib3:amd64.
- Preparing to unpack .../05-libtmglib3_3.9.0-3_amd64.deb ...
- Unpacking libtmglib3:amd64 (3.9.0-3) ...
- Selecting previously unselected package liblapacke:amd64.
- Preparing to unpack .../06-liblapacke_3.9.0-3_amd64.deb ...
- Unpacking liblapacke:amd64 (3.9.0-3) ...
- Selecting previously unselected package libopenblas-pthread-dev:amd64.
- Preparing to unpack .../07-libopenblas-pthread-dev_0.3.13+ds-3_amd64.deb ...
- Unpacking libopenblas-pthread-dev:amd64 (0.3.13+ds-3) ...
- Selecting previously unselected package libtmglib-dev:amd64.
- Preparing to unpack .../08-libtmglib-dev_3.9.0-3_amd64.deb ...
- Unpacking libtmglib-dev:amd64 (3.9.0-3) ...
- Selecting previously unselected package liblapacke-dev:amd64.
- Preparing to unpack .../09-liblapacke-dev_3.9.0-3_amd64.deb ...
- Unpacking liblapacke-dev:amd64 (3.9.0-3) ...
- Selecting previously unselected package libopenblas0:amd64.
- Preparing to unpack .../10-libopenblas0_0.3.13+ds-3_amd64.deb ...
- Unpacking libopenblas0:amd64 (0.3.13+ds-3) ...
- Selecting previously unselected package libopenblas-dev:amd64.
- Preparing to unpack .../11-libopenblas-dev_0.3.13+ds-3_amd64.deb ...
- Unpacking libopenblas-dev:amd64 (0.3.13+ds-3) ...
- Selecting previously unselected package libxml2:amd64.
- Preparing to unpack .../12-libxml2_2.9.10+dfsg-6.7+deb11u2_amd64.deb ...
- Unpacking libxml2:amd64 (2.9.10+dfsg-6.7+deb11u2) ...
- Selecting previously unselected package pkg-config.
- Preparing to unpack .../13-pkg-config_0.29.2-1_amd64.deb ...
- Unpacking pkg-config (0.29.2-1) ...
- Selecting previously unselected package shared-mime-info.
- Preparing to unpack .../14-shared-mime-info_2.0-1_amd64.deb ...
- Unpacking shared-mime-info (2.0-1) ...
- Selecting previously unselected package xdg-user-dirs.
- Preparing to unpack .../15-xdg-user-dirs_0.17-2_amd64.deb ...
- Unpacking xdg-user-dirs (0.17-2) ...
- Setting up libicu67:amd64 (67.1-7) ...
- Setting up xdg-user-dirs (0.17-2) ...
- Setting up libglib2.0-0:amd64 (2.66.8-1) ...
- No schema files found: doing nothing.
- Setting up libglib2.0-data (2.66.8-1) ...
- Setting up pkg-config (0.29.2-1) ...
- Setting up libgfortran5:amd64 (10.2.1-6) ...
- Setting up libxml2:amd64 (2.9.10+dfsg-6.7+deb11u2) ...
- Setting up libopenblas0-pthread:amd64 (0.3.13+ds-3) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode
- Setting up libtmglib3:amd64 (3.9.0-3) ...
- Setting up shared-mime-info (2.0-1) ...
- Setting up libopenblas0:amd64 (0.3.13+ds-3) ...
- Setting up liblapacke:amd64 (3.9.0-3) ...
- Setting up libopenblas-pthread-dev:amd64 (0.3.13+ds-3) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode
- Setting up libopenblas-dev:amd64 (0.3.13+ds-3) ...
- Setting up libtmglib-dev:amd64 (3.9.0-3) ...
- Setting up liblapacke-dev:amd64 (3.9.0-3) ...
- Processing triggers for libc-bin (2.31-13+deb11u3) ...

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved base.v0.15.0  (cached)
-> retrieved csexp.1.5.1  (cached)
-> retrieved ctypes.0.16.0  (cached)
-> retrieved dune-configurator.3.4.1  (cached)
-> installed conf-pkg-config.2
-> installed conf-openblas.0.2.1
-> installed csexp.1.5.1
-> retrieved eigen.0.3.3  (cached)
-> retrieved integers.0.7.0  (cached)
-> retrieved owl.0.5.0, owl-base.0.5.0  (cached)
-> installed integers.0.7.0
-> retrieved owl-ode.0.0.8  (cached)
-> retrieved sexplib0.v0.15.1  (cached)
-> retrieved stdio.v0.15.0  (cached)
-> installed sexplib0.v0.15.1
-> installed dune-configurator.3.4.1
-> installed owl-base.0.5.0
-> installed base.v0.15.0
-> installed stdio.v0.15.0
-> installed ctypes.0.16.0
-> installed eigen.0.3.3
-> installed owl.0.5.0
-> installed owl-ode.0.0.8
Done.
# Run eval $(opam env) to update the current shell environment
The following actions will be performed:
=== install 1 package
  - install cviode 0.0.3

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing  1/3:
-> retrieved cviode.0.0.3  (cached)
Processing  2/3: [cviode: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "cviode" "-j" "31" (CWD=/home/opam/.opam/4.14/.opam-switch/build/cviode.0.0.3)
-> compiled  cviode.0.0.3
-> installed cviode.0.0.3
Done.
# Run eval $(opam env) to update the current shell environment
2022-07-27 05:25.40 ---> saved as "b6b2d89545a1850607484405672007a7ae3d25d8b127146ac42b073c70464aec"

/home/opam: (run (network host)
                 (shell "opam update --depexts"))
+ /usr/bin/sudo "apt-get" "update"
- Hit:1 http://deb.debian.org/debian bullseye InRelease
- Hit:2 http://deb.debian.org/debian-security bullseye-security InRelease
- Hit:3 http://deb.debian.org/debian bullseye-updates InRelease
- Reading package lists...
- 
2022-07-27 05:25.46 ---> saved as "2aff47ab3bd668b13dd8e2806c01f1716fef9f348534530097811edad1f31b8a"

/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
                 (network host)
                 (shell  "opam remove cviode.0.0.3 && opam install --deps-only --with-test cviode.0.0.3 && opam install -v --with-test cviode.0.0.3;\
                        \n        res=$?;\
                        \n        test \"$res\" != 31 && exit \"$res\";\
                        \n        export OPAMCLI=2.0;\
                        \n        build_dir=$(opam var prefix)/.opam-switch/build;\
                        \n        failed=$(ls \"$build_dir\");\
                        \n        for pkg in $failed; do\
                        \n          if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-11\\\"\"; then\
                        \n            echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
                        \n          fi;\
                        \n        done;\
                        \n        exit 1"))
The following actions will be performed:
=== remove 1 package
  - remove cviode 0.0.3

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> removed   cviode.0.0.3
Done.
# Run eval $(opam env) to update the current shell environment
Nothing to do.
# Run eval $(opam env) to update the current shell environment
The following actions will be performed:
=== install 1 package
  - install cviode 0.0.3

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing  1/3:
-> retrieved cviode.0.0.3  (cached)
Processing  2/3: [cviode: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "cviode" "-j" "31" (CWD=/home/opam/.opam/4.14/.opam-switch/build/cviode.0.0.3)
-> compiled  cviode.0.0.3
-> installed cviode.0.0.3
Done.
# Run eval $(opam env) to update the current shell environment
2022-07-27 05:26.20 ---> saved as "e92fc612e1c26e3c73ea131cc90d460892320a24a25a7e7fb4cabe617e5a3050"
Job succeeded
2022-07-27 05:26.55: Job succeeded