- github
- ocaml
- opam-repository
- 3e0c39
- compilers,5.4,dune.3.22.2,revdeps,orrandomForest.3.0.0
(not at the head of any monitored branch or PR)
2026-04-13 14:42.33: New job: test orrandomForest.3.0.0 with dune.3.22.2, using opam dev
from https://github.com/ocaml/opam-repository.git#refs/pull/29704/head (3e0c395e7b1393a792367f8edca3654dac71e6fd)
on debian-13-ocaml-5.4/amd64
To reproduce locally:
cd $(mktemp -d)
git clone --recursive "https://github.com/ocaml/opam-repository.git" && cd "opam-repository" && git fetch origin "refs/pull/29704/head" && git reset --hard 3e0c395e
git fetch origin master
git merge --no-edit ba4685aeec7b28fde6af30c7b83004704c68c86a
cat > ../Dockerfile <<'END-OF-DOCKERFILE'
FROM ocaml/opam:debian-13-ocaml-5.4@sha256:a447b546feb1d9aedc90fda889d688eb9be4d3bdea086d5b2f4f59f38f224ef4
USER 1000:1000
WORKDIR /home/opam
RUN sudo ln -f /usr/bin/opam-dev /usr/bin/opam
RUN opam init --reinit -ni
RUN opam option solver=builtin-0install && opam config report
ENV OPAMDOWNLOADJOBS="1"
ENV OPAMERRLOGLEN="0"
ENV OPAMPRECISETRACKING="1"
ENV CI="true"
ENV OPAM_REPO_CI="true"
RUN rm -rf opam-repository/
COPY --chown=1000:1000 . opam-repository/
RUN opam repository set-url --strict default opam-repository/
RUN opam update --depexts || true
RUN opam pin add -k version -yn dune.3.22.2 3.22.2
RUN opam reinstall dune.3.22.2; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-13\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'dune.3.22.2' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
RUN opam reinstall orrandomForest.3.0.0; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-13\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'orrandomForest.3.0.0' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
RUN (opam reinstall --with-test orrandomForest.3.0.0) || true
RUN opam reinstall --with-test --verbose orrandomForest.3.0.0; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-13\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'orrandomForest.3.0.0' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
END-OF-DOCKERFILE
docker build -f ../Dockerfile .
2026-04-13 14:42.33: Using cache hint "ocaml/opam:debian-13-ocaml-5.4@sha256:a447b546feb1d9aedc90fda889d688eb9be4d3bdea086d5b2f4f59f38f224ef4-dune.3.22.2-orrandomForest.3.0.0-3e0c395e7b1393a792367f8edca3654dac71e6fd"
2026-04-13 14:42.33: Using OBuilder spec:
((from ocaml/opam:debian-13-ocaml-5.4@sha256:a447b546feb1d9aedc90fda889d688eb9be4d3bdea086d5b2f4f59f38f224ef4)
(user (uid 1000) (gid 1000))
(workdir /home/opam)
(run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
(run (network host)
(shell "opam init --reinit --config .opamrc-sandbox -ni"))
(run (shell "opam option solver=builtin-0install && opam config report"))
(env OPAMDOWNLOADJOBS 1)
(env OPAMERRLOGLEN 0)
(env OPAMPRECISETRACKING 1)
(env CI true)
(env OPAM_REPO_CI true)
(run (shell "rm -rf opam-repository/"))
(copy (src .) (dst opam-repository/))
(run (shell "opam repository set-url --strict default opam-repository/"))
(run (network host)
(shell "opam update --depexts || true"))
(run (shell "opam pin add -k version -yn dune.3.22.2 3.22.2"))
(run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall dune.3.22.2;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'dune.3.22.2' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
(run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall orrandomForest.3.0.0;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'orrandomForest.3.0.0' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
(run (network host)
(shell "(opam reinstall --with-test orrandomForest.3.0.0) || true"))
(run (shell "opam reinstall --with-test --verbose orrandomForest.3.0.0;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'orrandomForest.3.0.0' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
)
2026-04-13 14:42.33: Waiting for resource in pool OCluster
2026-04-13 15:24.48: Waiting for worker…
2026-04-13 15:31.11: Got resource from pool OCluster
Building on eumache.caelum.ci.dev
All commits already cached
HEAD is now at ba4685aeec Merge pull request #29653 from yakobowski/camlidl
Merge made by the 'ort' strategy.
packages/chrome-trace/chrome-trace.3.22.2/opam | 39 +++++++++++
.../dune-action-plugin.3.22.2/opam | 52 +++++++++++++++
.../dune-action-trace.3.22.2/opam | 39 +++++++++++
.../dune-build-info/dune-build-info.3.22.2/opam | 45 +++++++++++++
.../dune-configurator.3.22.2/opam | 49 ++++++++++++++
packages/dune-glob/dune-glob.3.22.2/opam | 42 ++++++++++++
.../dune-private-libs.3.22.2/opam | 50 +++++++++++++++
packages/dune-rpc-lwt/dune-rpc-lwt.3.22.2/opam | 41 ++++++++++++
packages/dune-rpc/dune-rpc.3.22.2/opam | 44 +++++++++++++
packages/dune-site/dune-site.3.22.2/opam | 37 +++++++++++
packages/dune/dune.3.22.2/opam | 75 ++++++++++++++++++++++
packages/dyn/dyn.3.22.2/opam | 40 ++++++++++++
packages/fs-io/fs-io.3.22.2/opam | 39 +++++++++++
packages/ocamlc-loc/ocamlc-loc.3.22.2/opam | 43 +++++++++++++
packages/ordering/ordering.3.22.2/opam | 38 +++++++++++
packages/stdune/stdune.3.22.2/opam | 46 +++++++++++++
packages/top-closure/top-closure.3.22.2/opam | 38 +++++++++++
packages/xdg/xdg.3.22.2/opam | 39 +++++++++++
18 files changed, 796 insertions(+)
create mode 100644 packages/chrome-trace/chrome-trace.3.22.2/opam
create mode 100644 packages/dune-action-plugin/dune-action-plugin.3.22.2/opam
create mode 100644 packages/dune-action-trace/dune-action-trace.3.22.2/opam
create mode 100644 packages/dune-build-info/dune-build-info.3.22.2/opam
create mode 100644 packages/dune-configurator/dune-configurator.3.22.2/opam
create mode 100644 packages/dune-glob/dune-glob.3.22.2/opam
create mode 100644 packages/dune-private-libs/dune-private-libs.3.22.2/opam
create mode 100644 packages/dune-rpc-lwt/dune-rpc-lwt.3.22.2/opam
create mode 100644 packages/dune-rpc/dune-rpc.3.22.2/opam
create mode 100644 packages/dune-site/dune-site.3.22.2/opam
create mode 100644 packages/dune/dune.3.22.2/opam
create mode 100644 packages/dyn/dyn.3.22.2/opam
create mode 100644 packages/fs-io/fs-io.3.22.2/opam
create mode 100644 packages/ocamlc-loc/ocamlc-loc.3.22.2/opam
create mode 100644 packages/ordering/ordering.3.22.2/opam
create mode 100644 packages/stdune/stdune.3.22.2/opam
create mode 100644 packages/top-closure/top-closure.3.22.2/opam
create mode 100644 packages/xdg/xdg.3.22.2/opam
(from ocaml/opam:debian-13-ocaml-5.4@sha256:a447b546feb1d9aedc90fda889d688eb9be4d3bdea086d5b2f4f59f38f224ef4)
Unable to find image 'ocaml/opam:debian-13-ocaml-5.4@sha256:a447b546feb1d9aedc90fda889d688eb9be4d3bdea086d5b2f4f59f38f224ef4' locally
docker.io/ocaml/opam@sha256:a447b546feb1d9aedc90fda889d688eb9be4d3bdea086d5b2f4f59f38f224ef4: Pulling from ocaml/opam
8f6ad858d0a4: Already exists
9cb5e198c8cf: Already exists
2d346d36dcf2: Already exists
cdc35e289b8d: Already exists
aeb7244bb580: Already exists
fc1943254a0d: Already exists
84238c416f8e: Already exists
fbbfe75d3112: Already exists
221fdc5d9929: Already exists
1fec9149b52a: Already exists
9c6e52557f24: Already exists
8737f5036aae: Already exists
d69c4074de14: Already exists
7237152a5f04: Already exists
fba4b414d8a0: Already exists
40d552afb3ef: Already exists
077cc17dc8e4: Already exists
077cc17dc8e4: Already exists
169e1be36a55: Already exists
0a8a005097ab: Already exists
caba3ec4b361: Already exists
6a364dc641f8: Already exists
4f4fb700ef54: Already exists
ab8052928cdc: Already exists
f5717a28dd6a: Already exists
79233a9b9bed: Already exists
d832d53e7392: Already exists
1872dad82243: Already exists
bfd849b08ba7: Already exists
834a8024ef15: Already exists
98ccec79258b: Already exists
fb48f36a0542: Already exists
3688b13db8e7: Already exists
a5c099f5f72c: Already exists
1ff1760de5b0: Already exists
98eec6764aa5: Already exists
aa22ae69debd: Already exists
12bfb7b962a2: Already exists
ec25ce9bb816: Already exists
beadd3cf7357: Already exists
d0d0c65a426d: Already exists
3574d8cdbcc5: Pulling fs layer
b74552b4db71: Pulling fs layer
27b1c047e252: Pulling fs layer
26897dca61f0: Pulling fs layer
8cb12431740e: Pulling fs layer
0dec740ecd51: Pulling fs layer
79518206bd07: Pulling fs layer
8cb12431740e: Waiting
79518206bd07: Waiting
26897dca61f0: Waiting
0dec740ecd51: Waiting
3574d8cdbcc5: Verifying Checksum
3574d8cdbcc5: Download complete
b74552b4db71: Verifying Checksum
b74552b4db71: Download complete
3574d8cdbcc5: Pull complete
27b1c047e252: Verifying Checksum
27b1c047e252: Download complete
b74552b4db71: Pull complete
27b1c047e252: Pull complete
8cb12431740e: Verifying Checksum
8cb12431740e: Download complete
0dec740ecd51: Download complete
79518206bd07: Verifying Checksum
79518206bd07: Download complete
26897dca61f0: Verifying Checksum
26897dca61f0: Download complete
26897dca61f0: Pull complete
8cb12431740e: Pull complete
0dec740ecd51: Pull complete
79518206bd07: Pull complete
Digest: sha256:a447b546feb1d9aedc90fda889d688eb9be4d3bdea086d5b2f4f59f38f224ef4
Status: Downloaded newer image for ocaml/opam@sha256:a447b546feb1d9aedc90fda889d688eb9be4d3bdea086d5b2f4f59f38f224ef4
2026-04-13 15:31.13 ---> using "650db199dd47c38a0926a758262f0be95fb78e2d9a79cbdc2809fa2b15683d52" from cache
/: (user (uid 1000) (gid 1000))
/: (workdir /home/opam)
/home/opam: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
2026-04-13 15:31.13 ---> using "1d82b13dae11ba0e4ae4c53498d44d66e368b802cfcb77b29900c3af7e2a1562" from cache
/home/opam: (run (network host)
(shell "opam init --reinit --config .opamrc-sandbox -ni"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
This version of opam requires an update to the layout of /home/opam/.opam from version 2.0 to version 2.2, which can't be reverted.
You may want to back it up before going further.
Continue? [Y/n] y
Format upgrade done.
<><> Updating repositories ><><><><><><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
2026-04-13 15:31.13 ---> using "8fc56361284f52a58bad5297203dc12518b6d67d540112c1ecc4d982140daeca" from cache
/home/opam: (run (shell "opam option solver=builtin-0install && opam config report"))
Set to 'builtin-0install' the field solver in global configuration
# opam config report
# opam-version 2.5.0
# self-upgrade no
# system arch=x86_64 os=linux os-distribution=debian os-version=13
# solver builtin-0install
# install-criteria -changed,-count[avoid-version,solution]
# upgrade-criteria -count[avoid-version,solution]
# jobs 71
# repositories 1 (version-controlled)
# pinned 1 (version)
# current-switch 5.4
# invariant ["ocaml-base-compiler" {= "5.4.1"}]
# compiler-packages ocaml-base-compiler.5.4.1, ocaml-compiler.5.4.1, ocaml-options-vanilla.1
# ocaml:native true
# ocaml:native-tools true
# ocaml:native-dynlink true
# ocaml:stubsdir /home/opam/.opam/5.4/lib/ocaml/stublibs:/home/opam/.opam/5.4/lib/ocaml
# ocaml:preinstalled false
# ocaml:compiler 5.4.1
2026-04-13 15:31.13 ---> using "fe9db6e6aedfe8a888a2521b45017dcd4b4a70e85e324e4a3527adef84a23afd" from cache
/home/opam: (env OPAMDOWNLOADJOBS 1)
/home/opam: (env OPAMERRLOGLEN 0)
/home/opam: (env OPAMPRECISETRACKING 1)
/home/opam: (env CI true)
/home/opam: (env OPAM_REPO_CI true)
/home/opam: (run (shell "rm -rf opam-repository/"))
2026-04-13 15:31.13 ---> using "3a79be73bc2436b5aae3b84f3727fd2fe0209a9b7334e20aac2d10fcd0f26769" from cache
/home/opam: (copy (src .) (dst opam-repository/))
2026-04-13 15:31.14 ---> using "306e2765f803e9ac22f1023f023e8bba6e1f5296fc47a318acebb969ba1b1204" from cache
/home/opam: (run (shell "opam repository set-url --strict default opam-repository/"))
[default] Initialised
2026-04-13 15:31.14 ---> using "9e9b4bad2baa72b9fad539bf23d04eb0f2a72097c5685706fe162459f8a36f61" from cache
/home/opam: (run (network host)
(shell "opam update --depexts || true"))
+ /usr/bin/sudo "apt-get" "update"
- Hit:1 http://deb.debian.org/debian trixie InRelease
- Get:2 http://deb.debian.org/debian trixie-updates InRelease [47.3 kB]
- Get:3 http://deb.debian.org/debian-security trixie-security InRelease [43.4 kB]
- Get:4 http://deb.debian.org/debian-security trixie-security/main amd64 Packages [122 kB]
- Fetched 213 kB in 4s (56.4 kB/s)
- Reading package lists...
-
2026-04-13 15:31.14 ---> using "2fb1ac5ca6037947ba1884eb3a92b9454761e371e0b3c1955630d8faadedabed" from cache
/home/opam: (run (shell "opam pin add -k version -yn dune.3.22.2 3.22.2"))
dune is now pinned to version 3.22.2
2026-04-13 15:31.14 ---> using "44c7d7d7595c4a41e6aab53eb1a771058e5fb0ec8e90350b08cc9f23cb3d5ed9" from cache
/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall dune.3.22.2;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'dune.3.22.2' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
dune.3.22.2 is not installed. Install it? [Y/n] y
The following actions will be performed:
=== install 1 package
- install dune 3.22.2 (pinned)
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved dune.3.22.2 (cached)
-> installed dune.3.22.2
Done.
# To update the current shell environment, run: eval $(opam env)
2026-04-13 15:31.14 ---> using "7aefc73d6425e27bc34bfbdb99d4d7e80ada815df45ed1df4e5c28f9ea60f0d6" from cache
/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall orrandomForest.3.0.0;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'orrandomForest.3.0.0' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
orrandomForest.3.0.0 is not installed. Install it? [Y/n] y
The following actions will be performed:
=== install 13 packages
- install batteries 3.10.0 [required by orrandomForest]
- install camlp-streams 5.0.1 [required by batteries]
- install conf-autoconf 0.2 [required by cpu]
- install conf-r 1.0.0 [required by orrandomForest]
- install cpm 12.2.0 [required by orrandomForest]
- install cpu 2.0.0 [required by parany]
- install dolog 6.0.0 [required by orrandomForest]
- install line_oriented 1.3.0 [required by orrandomForest]
- install minicli 5.0.2 [required by orrandomForest]
- install num 1.6 [required by batteries]
- install ocamlfind 1.9.8 [required by batteries]
- install orrandomForest 3.0.0
- install parany 14.0.1 [required by orrandomForest]
The following system packages will first need to be installed:
autoconf r-base-core
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run apt-get to install them (may need root/sudo access)
2. Display the recommended apt-get command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "autoconf" "r-base-core"
- Preconfiguring packages ...
- Selecting previously unselected package libdbus-1-3:amd64.
- (Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
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- Setting up libxrender1:amd64 (1:0.9.12-1) ...
- Setting up libdatrie1:amd64 (0.2.13-3+b1) ...
- Setting up xdg-user-dirs (0.18-2) ...
- Setting up libxcb-render0:amd64 (1.17.0-2+b1) ...
- Setting up libclone-perl:amd64 (0.47-1+b1) ...
- Setting up libglvnd0:amd64 (1.7.0-1+b2) ...
- Setting up libio-stringy-perl (2.113-2) ...
- Setting up libtirpc-common (1.3.6+ds-1) ...
- Setting up libhtml-tagset-perl (3.24-1) ...
- Setting up libauthen-sasl-perl (2.1700-1) ...
- Setting up libxcb-glx0:amd64 (1.17.0-2+b1) ...
- Setting up liblwp-mediatypes-perl (6.04-2) ...
- Setting up libxcb-shape0:amd64 (1.17.0-2+b1) ...
- Setting up x11-common (1:7.7+24+deb13u1) ...
- invoke-rc.d: could not determine current runlevel
- invoke-rc.d: policy-rc.d denied execution of start.
- Setting up libtry-tiny-perl (0.32-1) ...
- Setting up libsensors-config (1:3.6.2-2) ...
- Setting up libxxf86dga1:amd64 (2:1.1.5-1+b3) ...
- Setting up libdeflate0:amd64 (1.23-2) ...
- Setting up perl-openssl-defaults:amd64 (7+b2) ...
- Setting up m4 (1.4.19-8) ...
- Setting up libencode-locale-perl (1.05-3) ...
- Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ...
- Setting up libtext-wrapi18n-perl (0.06-10) ...
- Setting up libjbig0:amd64 (2.1-6.1+b2) ...
- Setting up libpcre2-16-0:amd64 (10.46-1~deb13u1) ...
- Setting up libelf1t64:amd64 (0.192-4) ...
- Setting up libxxf86vm1:amd64 (1:1.1.4-1+b4) ...
- Setting up libxcb-present0:amd64 (1.17.0-2+b1) ...
- Setting up zip (3.0-15) ...
- Setting up autotools-dev (20240727.1) ...
- Setting up libz3-4:amd64 (4.13.3-1) ...
- Setting up libpcre2-32-0:amd64 (10.46-1~deb13u1) ...
- Setting up libglib2.0-0t64:amd64 (2.84.4-3~deb13u2) ...
- No schema files found: doing nothing.
- Setting up libblas3:amd64 (3.12.1-6) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
- Setting up libglib2.0-data (2.84.4-3~deb13u2) ...
- Setting up libpkgconf3:amd64 (1.8.1-4) ...
- Setting up libgles2:amd64 (1.7.0-1+b2) ...
- Setting up libjpeg62-turbo:amd64 (1:2.1.5-4) ...
- Setting up libdata-dump-perl (1.25-1) ...
- Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-4) ...
- Setting up libxfixes3:amd64 (1:6.0.0-2+b4) ...
- Setting up libxcb-sync1:amd64 (1.17.0-2+b1) ...
- Setting up libipc-system-simple-perl (1.30-2) ...
- Setting up libxml-xpathengine-perl (0.14-2) ...
- Setting up libncurses6:amd64 (6.5+20250216-2) ...
- Setting up libdbus-1-3:amd64 (1.16.2-2) ...
- Setting up libio-compress-brotli-perl (0.004001-2+b3) ...
- Setting up libfribidi0:amd64 (1.0.16-1) ...
- Setting up libxinerama1:amd64 (2:1.1.4-3+b4) ...
- Setting up libxv1:amd64 (2:1.0.11-1.1+b3) ...
- Setting up fonts-dejavu-mono (2.37-8) ...
- Setting up libpng16-16t64:amd64 (1.6.48-1+deb13u4) ...
- Setting up libio-html-perl (1.004-3) ...
- Setting up libxrandr2:amd64 (2:1.5.4-1+b3) ...
- Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ...
- Setting up fonts-dejavu-core (2.37-8) ...
- Setting up pkgconf-bin (1.8.1-4) ...
- Setting up libsensors5:amd64 (1:3.6.2-2) ...
- Setting up libgfortran5:amd64 (14.2.0-19) ...
- Setting up libvulkan1:amd64 (1.4.309.0-1) ...
- Setting up autoconf (2.72-3.1) ...
- Setting up libwebp7:amd64 (1.5.0-0.1) ...
- Setting up libtimedate-perl (2.3300-2) ...
- Setting up liblzma-dev:amd64 (5.8.1-1) ...
- Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ...
- Setting up libpcre2-posix3:amd64 (10.46-1~deb13u1) ...
- Setting up sensible-utils (0.0.25) ...
- Setting up libxshmfence1:amd64 (1.3.3-1) ...
- Setting up libtiff6:amd64 (4.7.0-3+deb13u2) ...
- Setting up libxcb-randr0:amd64 (1.17.0-2+b1) ...
- Setting up dbus-session-bus-common (1.16.2-2) ...
- Setting up libthai-data (0.1.29-2) ...
- Setting up libxss1:amd64 (1:1.2.3-1+b3) ...
- Setting up libicu76:amd64 (76.1-4) ...
- Setting up libxkbfile1:amd64 (1:1.1.0-1+b4) ...
- Setting up libpaper2:amd64 (2.2.5-0.3+b2) ...
- Setting up dbus-system-bus-common (1.16.2-2) ...
- Setting up libdeflate-dev:amd64 (1.23-2) ...
- Setting up libdrm-common (2.4.124-2) ...
- Setting up libxcomposite1:amd64 (1:0.4.6-1) ...
- Setting up readline-common (8.2-6) ...
- Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-2.1+deb13u2) ...
- Setting up xdg-utils (1.2.1-2) ...
- update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
- Setting up liburi-perl (5.30-1) ...
- Setting up dbus-bin (1.16.2-2) ...
- Setting up libx11-protocol-perl (0.56-9) ...
- Setting up libblas-dev:amd64 (3.12.1-6) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
- Setting up libbz2-dev:amd64 (1.0.8-6) ...
- Setting up libwayland-client0:amd64 (1.23.1-3) ...
- Setting up libnet-ssleay-perl:amd64 (1.94-3) ...
- Setting up automake (1:1.17-4) ...
- update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode
- Setting up libgfortran-14-dev:amd64 (14.2.0-19) ...
- Setting up libllvm19:amd64 (1:19.1.7-3+b1) ...
- Setting up libice6:amd64 (2:1.1.1-1) ...
- Setting up libhttp-date-perl (6.06-1) ...
- Setting up liblapack3:amd64 (3.12.1-6) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- Setting up libncurses-dev:amd64 (6.5+20250216-2) ...
- Setting up libfile-basedir-perl (0.09-2) ...
- Setting up libfile-listing-perl (6.16-1) ...
- Setting up libpcre2-dev:amd64 (10.46-1~deb13u1) ...
- Setting up libtirpc3t64:amd64 (1.3.6+ds-1) ...
- Setting up libpng-tools (1.6.48-1+deb13u4) ...
- Setting up fontconfig-config (2.15.0-2.3) ...
- Setting up libxtst6:amd64 (2:1.2.5-1) ...
- Setting up libxcursor1:amd64 (1:1.2.3-1) ...
- Setting up libpng-dev:amd64 (1.6.48-1+deb13u4) ...
- Setting up libjpeg-dev:amd64 (1:2.1.5-4) ...
- Setting up libnet-http-perl (6.23-1) ...
- Setting up dbus-daemon (1.16.2-2) ...
- Setting up libpaper-utils (2.2.5-0.3+b2) ...
- Setting up gfortran-14-x86-64-linux-gnu (14.2.0-19) ...
- Setting up pkgconf:amd64 (1.8.1-4) ...
- Setting up libthai0:amd64 (0.1.29-2+b1) ...
- Setting up libtirpc-dev:amd64 (1.3.6+ds-1) ...
- Setting up libfreetype6:amd64 (2.13.3+dfsg-1+deb13u1) ...
- Setting up dbus (1.16.2-2) ...
- invoke-rc.d: could not determine current runlevel
- invoke-rc.d: policy-rc.d denied execution of start.
- Setting up shared-mime-info (2.4-5+b2) ...
- Setting up liblapack-dev:amd64 (3.12.1-6) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
- Setting up icu-devtools (76.1-4) ...
- Setting up ucf (3.0052) ...
- Setting up libfile-desktopentry-perl (0.22-3) ...
- Setting up libreadline8t64:amd64 (8.2-6) ...
- Setting up libwww-robotrules-perl (6.02-1) ...
- Setting up libdrm2:amd64 (2.4.124-2) ...
- Setting up libhtml-parser-perl:amd64 (3.83-1+b2) ...
- Setting up libharfbuzz0b:amd64 (10.2.0-1+b1) ...
- Setting up libfontconfig1:amd64 (2.15.0-2.3) ...
- Setting up gfortran-14 (14.2.0-19) ...
- Setting up libsm6:amd64 (2:1.2.6-1) ...
- Setting up libicu-dev:amd64 (76.1-4) ...
- Setting up libio-socket-ssl-perl (2.089-1) ...
- Setting up libhttp-message-perl (7.00-2) ...
- Setting up libdrm-amdgpu1:amd64 (2.4.124-2) ...
- Setting up libhtml-form-perl (6.12-1) ...
- Setting up mesa-vulkan-drivers:amd64 (25.0.7-2) ...
- Setting up libfile-mimeinfo-perl (0.35-1) ...
- Setting up libhttp-negotiate-perl (6.01-2) ...
- Setting up fontconfig (2.15.0-2.3) ...
- Regenerating fonts cache...
- done.
- Setting up libxft2:amd64 (2.3.6-1+b4) ...
- Setting up libhttp-cookies-perl (6.11-1) ...
- Setting up libhtml-tree-perl (5.07-3) ...
- Setting up libtk8.6:amd64 (8.6.16-1) ...
- Setting up libpango-1.0-0:amd64 (1.56.3-1) ...
- Setting up libdrm-intel1:amd64 (2.4.124-2) ...
- Setting up libhtml-format-perl (2.16-2) ...
- Setting up libreadline-dev:amd64 (8.2-6) ...
- Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1) ...
- Setting up gfortran (4:14.2.0-1) ...
- update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
- update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
- Setting up libcairo2:amd64 (1.18.4-1+b1) ...
- Setting up libnet-smtp-ssl-perl (1.04-2) ...
- Setting up libmailtools-perl (2.22-1) ...
- Setting up libxt6t64:amd64 (1:1.2.1-1.2+b2) ...
- Setting up libhttp-daemon-perl (6.16-1) ...
- Setting up libpangoft2-1.0-0:amd64 (1.56.3-1) ...
- Setting up libpangocairo-1.0-0:amd64 (1.56.3-1) ...
- Setting up mesa-libgallium:amd64 (25.0.7-2) ...
- Setting up libxmu6:amd64 (2:1.1.3-3+b4) ...
- Setting up libgbm1:amd64 (25.0.7-2) ...
- Setting up libgl1-mesa-dri:amd64 (25.0.7-2) ...
- Setting up libxaw7:amd64 (2:1.0.16-1) ...
- Setting up x11-xserver-utils (7.7+11) ...
- Setting up libegl-mesa0:amd64 (25.0.7-2) ...
- Setting up r-base-core (4.5.0-3) ...
- Creating config file /etc/R/Renviron with new version
- Setting up r-cran-lattice (0.22-7-1) ...
- Setting up r-cran-nlme (3.1.168-1) ...
- Setting up r-cran-cluster (2.1.8.1-1) ...
- Setting up libegl1:amd64 (1.7.0-1+b2) ...
- Setting up r-cran-nnet (7.3-20-1) ...
- Setting up r-cran-codetools (0.2-20-1) ...
- Setting up r-cran-boot (1.3-31-1) ...
- Setting up libglx-mesa0:amd64 (25.0.7-2) ...
- Setting up r-base-dev (4.5.0-3) ...
- Setting up libglx0:amd64 (1.7.0-1+b2) ...
- Setting up r-cran-spatial (7.3-18-1) ...
- Setting up r-cran-mass (7.3-65-1) ...
- Setting up r-cran-foreign (0.8.90-1) ...
- Setting up libgl1:amd64 (1.7.0-1+b2) ...
- Setting up r-cran-matrix (1.7-3-1) ...
- Setting up r-cran-kernsmooth (2.23-26-1) ...
- Setting up zutty (0.16.2.20241020+dfsg1-1) ...
- update-alternatives: using /usr/bin/zutty to provide /usr/bin/x-terminal-emulator (x-terminal-emulator) in auto mode
- Setting up r-cran-mgcv (1.9-3-1) ...
- Setting up x11-utils (7.7+7) ...
- Setting up r-cran-class (7.3-23-1) ...
- Setting up r-cran-survival (3.8-3-1) ...
- Setting up r-cran-rpart (4.1.24-1) ...
- Setting up r-recommended (4.5.0-3) ...
- Setting up liblwp-protocol-https-perl (6.14-1) ...
- Setting up libwww-perl (6.78-1) ...
- Setting up libxml-parser-perl (2.47-2~deb13u1) ...
- Setting up libxml-twig-perl (1:3.52-3) ...
- Setting up libnet-dbus-perl (1.2.0-2+b3) ...
- Processing triggers for libc-bin (2.41-12+deb13u2) ...
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved batteries.3.10.0 (cached)
-> retrieved camlp-streams.5.0.1 (cached)
-> retrieved conf-r.1.0.0 (cached)
-> retrieved cpm.12.2.0 (cached)
-> retrieved cpu.2.0.0 (cached)
-> retrieved dolog.6.0.0 (cached)
-> retrieved line_oriented.1.3.0 (cached)
-> retrieved minicli.5.0.2 (cached)
-> retrieved num.1.6 (cached)
-> retrieved ocamlfind.1.9.8 (cached)
-> installed conf-autoconf.0.2
-> retrieved orrandomForest.3.0.0 (https://opam.ocaml.org/cache)
-> retrieved parany.14.0.1 (cached)
-> installed dolog.6.0.0
-> installed minicli.5.0.2
-> installed conf-r.1.0.0
-> installed camlp-streams.5.0.1
-> installed num.1.6
-> installed cpu.2.0.0
-> installed parany.14.0.1
-> installed ocamlfind.1.9.8
-> installed batteries.3.10.0
-> installed line_oriented.1.3.0
-> installed cpm.12.2.0
[ERROR] The installation of orrandomForest failed at "R CMD BATCH install_randomForest.r".
#=== ERROR while installing orrandomForest.3.0.0 ==============================#
# context 2.5.0 | linux/x86_64 | ocaml-base-compiler.5.4.1 | file:///home/opam/opam-repository
# path ~/.opam/5.4/.opam-switch/build/orrandomForest.3.0.0
# command ~/.opam/opam-init/hooks/sandbox.sh install R CMD BATCH install_randomForest.r
# exit-code 1
# env-file ~/.opam/log/orrandomForest-7-979536.env
# output-file ~/.opam/log/orrandomForest-7-979536.out
<><> Error report <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><>
+- The following actions failed
| - install orrandomForest 3.0.0
+-
+- The following changes have been performed
| - install batteries 3.10.0
| - install camlp-streams 5.0.1
| - install conf-autoconf 0.2
| - install conf-r 1.0.0
| - install cpm 12.2.0
| - install cpu 2.0.0
| - install dolog 6.0.0
| - install line_oriented 1.3.0
| - install minicli 5.0.2
| - install num 1.6
| - install ocamlfind 1.9.8
| - install parany 14.0.1
+-
<><> orrandomForest.3.0.0 troubleshooting <><><><><><><><><><><><><><><><><><><>
=> Please interact with R to install needed things in user-space:
R
install.packages('Marix', repos='http://cran.r-project.org')
install.packages('randomForest', repos='http://cran.r-project.org')
The former state can be restored with:
/usr/bin/opam switch import "/home/opam/.opam/5.4/.opam-switch/backup/state-20260413153114.export"
# To update the current shell environment, run: eval $(opam env)
[WARNING] OPAMCONFIRMLEVEL was ignored because CLI 2.0 was requested and it was introduced in 2.1.
[WARNING] OPAMCONFIRMLEVEL was ignored because CLI 2.0 was requested and it was introduced in 2.1.
"/usr/bin/env" "bash" "-c" "opam reinstall orrandomForest.3.0.0;
res=$?;
test "$res" != 31 && exit "$res";
export OPAMCLI=2.0;
build_dir=$(opam var prefix)/.opam-switch/build;
failed=$(ls "$build_dir");
partial_fails="";
for pkg in $failed; do
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-13\""; then
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.";
fi;
test "$pkg" != 'orrandomForest.3.0.0' && partial_fails="$partial_fails $pkg";
done;
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}";
exit 1" failed with exit status 1
2026-04-13 15:42.28: Job failed: Failed: Build failed
2026-04-13 15:42.28: Log analysis:
2026-04-13 15:42.28: >>>
[ERROR] The installation of orrandomForest failed at "R CMD BATCH install_randomForest.r".
(score = 20)
2026-04-13 15:42.28: The installation of orrandomForest failed at "R CMD BATCH install_randomForest.r".