(for PR #24267)
2025-11-10 11:02.17: New job: build orrandomForest.1.0.0, using opam dev
from https://github.com/ocaml/opam-repository.git#refs/pull/24267/head (41de505ec8ff3637ab3cb06a41ccbc29683f566c)
on alpine-3.22-ocaml-4.14/amd64
To reproduce locally:
cd $(mktemp -d)
git clone --recursive "https://github.com/ocaml/opam-repository.git" && cd "opam-repository" && git fetch origin "refs/pull/24267/head" && git reset --hard 41de505e
git fetch origin master
git merge --no-edit 21f97b2e6d7c617fc0a79cc8e59b2e10690960e1
cat > ../Dockerfile <<'END-OF-DOCKERFILE'
FROM ocaml/opam:alpine-3.22-ocaml-4.14@sha256:035343faa2345fbb738069f2d899570ced75942aab3c76ec7fd2353ed127049a
USER 1000:1000
WORKDIR /home/opam
RUN sudo ln -f /usr/bin/opam-dev /usr/bin/opam
RUN opam init --reinit -ni
RUN opam option solver=builtin-0install && opam config report
ENV OPAMDOWNLOADJOBS="1"
ENV OPAMERRLOGLEN="0"
ENV OPAMPRECISETRACKING="1"
ENV CI="true"
ENV OPAM_REPO_CI="true"
RUN rm -rf opam-repository/
COPY --chown=1000:1000 . opam-repository/
RUN opam repository set-url --strict default opam-repository/
RUN opam update --depexts || true
RUN opam pin add -k version -yn orrandomForest.1.0.0 1.0.0
RUN opam reinstall orrandomForest.1.0.0; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"alpine-3.22\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'orrandomForest.1.0.0' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
END-OF-DOCKERFILE
docker build -f ../Dockerfile .
2025-11-10 11:02.17: Using cache hint "ocaml/opam:alpine-3.22-ocaml-4.14@sha256:035343faa2345fbb738069f2d899570ced75942aab3c76ec7fd2353ed127049a-orrandomForest.1.0.0-41de505ec8ff3637ab3cb06a41ccbc29683f566c"
2025-11-10 11:02.17: Using OBuilder spec:
((from ocaml/opam:alpine-3.22-ocaml-4.14@sha256:035343faa2345fbb738069f2d899570ced75942aab3c76ec7fd2353ed127049a)
(user (uid 1000) (gid 1000))
(workdir /home/opam)
(run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
(run (network host)
(shell "opam init --reinit --config .opamrc-sandbox -ni"))
(run (shell "opam option solver=builtin-0install && opam config report"))
(env OPAMDOWNLOADJOBS 1)
(env OPAMERRLOGLEN 0)
(env OPAMPRECISETRACKING 1)
(env CI true)
(env OPAM_REPO_CI true)
(run (shell "rm -rf opam-repository/"))
(copy (src .) (dst opam-repository/))
(run (shell "opam repository set-url --strict default opam-repository/"))
(run (network host)
(shell "opam update --depexts || true"))
(run (shell "opam pin add -k version -yn orrandomForest.1.0.0 1.0.0"))
(run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall orrandomForest.1.0.0;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"alpine-3.22\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'orrandomForest.1.0.0' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
)
2025-11-10 11:02.17: Waiting for resource in pool OCluster
2025-11-10 12:45.54: Waiting for worker…
2025-11-10 12:54.24: Got resource from pool OCluster
Building on asteria.caelum.ci.dev
All commits already cached
HEAD is now at 21f97b2e6d Merge pull request #28836 from dbuenzli/b0-publish-bytesrw.0.3.0
Merge made by the 'ort' strategy.
packages/odnnr/odnnr.2.0.0/opam | 4 +---
packages/oplsr/oplsr.8.0.1/opam | 3 +--
packages/orrandomForest/orrandomForest.1.0.0/opam | 5 +----
packages/orrandomForest/orrandomForest.2.0.1/opam | 7 +------
packages/orrandomForest/orrandomForest.3.0.0/opam | 7 +------
packages/orsvm_e1071/orsvm_e1071.2.0.0/opam | 3 ---
packages/orsvm_e1071/orsvm_e1071.3.0.0/opam | 5 +----
packages/orsvm_e1071/orsvm_e1071.3.0.1/opam | 2 +-
packages/orsvm_e1071/orsvm_e1071.3.0.2/opam | 2 +-
packages/orsvm_e1071/orsvm_e1071.4.0.0/opam | 2 +-
packages/orxgboost/orxgboost.1.0.1/opam | 5 +----
packages/orxgboost/orxgboost.1.1.0/opam | 5 +----
packages/orxgboost/orxgboost.1.2.0/opam | 5 +----
13 files changed, 12 insertions(+), 43 deletions(-)
(from ocaml/opam:alpine-3.22-ocaml-4.14@sha256:035343faa2345fbb738069f2d899570ced75942aab3c76ec7fd2353ed127049a)
Unable to find image 'ocaml/opam:alpine-3.22-ocaml-4.14@sha256:035343faa2345fbb738069f2d899570ced75942aab3c76ec7fd2353ed127049a' locally
docker.io/ocaml/opam@sha256:035343faa2345fbb738069f2d899570ced75942aab3c76ec7fd2353ed127049a: Pulling from ocaml/opam
2c9a24bd0ce4: Pulling fs layer
de1201c0f399: Pulling fs layer
92199d46e383: Pulling fs layer
8a5f26de7def: Pulling fs layer
204282843001: Pulling fs layer
2c9a24bd0ce4: Waiting
8a5f26de7def: Waiting
204282843001: Waiting
2c9a24bd0ce4: Verifying Checksum
2c9a24bd0ce4: Download complete
2c9a24bd0ce4: Pull complete
92199d46e383: Verifying Checksum
92199d46e383: Download complete
8a5f26de7def: Verifying Checksum
8a5f26de7def: Download complete
204282843001: Verifying Checksum
204282843001: Download complete
de1201c0f399: Verifying Checksum
de1201c0f399: Download complete
de1201c0f399: Pull complete
92199d46e383: Pull complete
8a5f26de7def: Pull complete
204282843001: Pull complete
Digest: sha256:035343faa2345fbb738069f2d899570ced75942aab3c76ec7fd2353ed127049a
Status: Downloaded newer image for ocaml/opam@sha256:035343faa2345fbb738069f2d899570ced75942aab3c76ec7fd2353ed127049a
2025-11-10 12:54.31 ---> using "531dd882a2fae5a34a8bfa5ee93af1613955008dcdcd99be6da6c29a1733a42a" from cache
/: (user (uid 1000) (gid 1000))
/: (workdir /home/opam)
/home/opam: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
2025-11-10 12:54.31 ---> using "5a6c475228238559086b0ae1d567a6d46415077fd45cc94075ef1ad6fb203311" from cache
/home/opam: (run (network host)
(shell "opam init --reinit --config .opamrc-sandbox -ni"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
Continue? [Y/n] y
This version of opam requires an update to the layout of /home/opam/.opam from version 2.0 to version 2.2, which can't be reverted.
You may want to back it up before going further.
Format upgrade done.
<><> Updating repositories ><><><><><><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
2025-11-10 12:54.31 ---> using "be58e76ddc4026c7cb0381161cd8022c146cb46f7c56ee7ce5b508d8f20470da" from cache
/home/opam: (run (shell "opam option solver=builtin-0install && opam config report"))
Set to 'builtin-0install' the field solver in global configuration
# opam config report
# opam-version 2.5.0~alpha1
# self-upgrade no
# system arch=x86_64 os=linux os-distribution=alpine os-version=3.22.2
# solver builtin-0install
# install-criteria -changed,-count[avoid-version,solution]
# upgrade-criteria -count[avoid-version,solution]
# jobs 255
# repositories 1 (version-controlled)
# pinned 1 (version)
# current-switch 4.14
# invariant ["ocaml-base-compiler" {= "4.14.2"}]
# compiler-packages ocaml-base-compiler.4.14.2, ocaml-options-vanilla.1
# ocaml:native true
# ocaml:native-tools true
# ocaml:native-dynlink true
# ocaml:stubsdir /home/opam/.opam/4.14/lib/ocaml/stublibs:/home/opam/.opam/4.14/lib/ocaml
# ocaml:preinstalled false
# ocaml:compiler 4.14.2
2025-11-10 12:54.31 ---> using "41a402bb9a1f269e83edd144d478274457c806d6af3c7cadbc83018b44e291fa" from cache
/home/opam: (env OPAMDOWNLOADJOBS 1)
/home/opam: (env OPAMERRLOGLEN 0)
/home/opam: (env OPAMPRECISETRACKING 1)
/home/opam: (env CI true)
/home/opam: (env OPAM_REPO_CI true)
/home/opam: (run (shell "rm -rf opam-repository/"))
2025-11-10 12:54.31 ---> using "b55ea0dc1e22e5598950c2a61d6e1d9c500a9c4efabb445967c24911e9648cfe" from cache
/home/opam: (copy (src .) (dst opam-repository/))
2025-11-10 12:54.31 ---> using "747c455959a43f93a0adb657cfa7d734c0669daa4ed9a158045f7c1e9c514d52" from cache
/home/opam: (run (shell "opam repository set-url --strict default opam-repository/"))
[default] Initialised
2025-11-10 12:54.31 ---> using "5dce4e0033a3f5f49c883c962abe86055c65a53db3bf306dd1d8765ee9311b54" from cache
/home/opam: (run (network host)
(shell "opam update --depexts || true"))
+ /usr/bin/sudo "apk" "update"
- fetch https://dl-cdn.alpinelinux.org/alpine/v3.22/main/x86_64/APKINDEX.tar.gz
- fetch https://dl-cdn.alpinelinux.org/alpine/v3.22/community/x86_64/APKINDEX.tar.gz
- fetch https://dl-cdn.alpinelinux.org/alpine/edge/main/x86_64/APKINDEX.tar.gz
- fetch https://dl-cdn.alpinelinux.org/alpine/edge/community/x86_64/APKINDEX.tar.gz
- fetch https://dl-cdn.alpinelinux.org/alpine/edge/testing/x86_64/APKINDEX.tar.gz
- v3.22.2-172-ge6bdca47b2e [https://dl-cdn.alpinelinux.org/alpine/v3.22/main]
- v3.22.2-166-gebde2617572 [https://dl-cdn.alpinelinux.org/alpine/v3.22/community]
- v20251016-1927-g48290b09546 [https://dl-cdn.alpinelinux.org/alpine/edge/main]
- v20251016-1931-ga4a370d28f6 [https://dl-cdn.alpinelinux.org/alpine/edge/community]
- v20251016-1924-g65079a05d5b [https://dl-cdn.alpinelinux.org/alpine/edge/testing]
- OK: 60029 distinct packages available
2025-11-10 12:54.36 ---> saved as "4a3a3e5e2569ddec1ff2e4aca8604ed2caacd8c470a24aa9a976efbafca11db6"
/home/opam: (run (shell "opam pin add -k version -yn orrandomForest.1.0.0 1.0.0"))
orrandomForest is now pinned to version 1.0.0
2025-11-10 12:54.37 ---> saved as "8fc77840d91ca60428b2b4342176cb4eb0d83d1870f88efc11d4573e33cbcd94"
/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall orrandomForest.1.0.0;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"alpine-3.22\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'orrandomForest.1.0.0' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
orrandomForest.1.0.0 is not installed. Install it? [Y/n] y
The following actions will be performed:
=== install 6 packages
- install conf-r 1.0.0 [required by orrandomForest]
- install dolog 3.0 [required by orrandomForest]
- install dune 3.20.2 [required by orrandomForest]
- install ocamlbuild 0.16.1 [required by dolog]
- install ocamlfind 1.9.8 [required by dolog]
- install orrandomForest 1.0.0 (pinned)
The following system packages will first need to be installed:
R
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run apk to install them (may need root/sudo access)
2. Display the recommended apk command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/bin/sudo "apk" "add" "R"
- (1/37) Installing R-mathlib (4.5.0-r0)
- (2/37) Installing tzdata (2025b-r0)
- (3/37) Installing libquadmath (14.2.0-r6)
- (4/37) Installing libgfortran (14.2.0-r6)
- (5/37) Installing openblas (0.3.28-r0)
- (6/37) Installing libxext (1.3.6-r2)
- (7/37) Installing libice (1.1.2-r0)
- (8/37) Installing libuuid (2.41-r9)
- (9/37) Installing libsm (1.2.5-r0)
- (10/37) Installing libxt (1.3.1-r0)
- (11/37) Installing libxmu (1.2.1-r0)
- (12/37) Installing libxrender (0.9.12-r0)
- (13/37) Installing libpng (1.6.47-r0)
- (14/37) Installing freetype (2.13.3-r0)
- (15/37) Installing fontconfig (2.15.0-r3)
- (16/37) Installing pixman (0.46.4-r0)
- (17/37) Installing cairo (1.18.4-r0)
- (18/37) Installing libdeflate (1.23-r0)
- (19/37) Installing libintl (0.24.1-r0)
- (20/37) Installing libeconf (0.6.3-r0)
- (21/37) Installing libblkid (2.41-r9)
- (22/37) Installing libmount (2.41-r9)
- (23/37) Installing glib (2.84.4-r0)
- (24/37) Installing icu-data-en (76.1-r1)
- Executing icu-data-en-76.1-r1.post-install
- *
- * If you need ICU with non-English locales and legacy charset support, install
- * package icu-data-full.
- *
- (25/37) Installing icu-libs (76.1-r1)
- (26/37) Installing libjpeg-turbo (3.1.0-r0)
- (27/37) Installing libxft (2.3.8-r3)
- (28/37) Installing fribidi (1.0.16-r1)
- (29/37) Installing graphite2 (1.3.14-r6)
- (30/37) Installing harfbuzz (11.2.1-r0)
- (31/37) Installing pango (1.56.3-r0)
- (32/37) Installing tcl (8.6.16-r0)
- (33/37) Installing libsharpyuv (1.5.0-r0)
- (34/37) Installing libwebp (1.5.0-r0)
- (35/37) Installing tiff (4.7.1-r0)
- (36/37) Installing tk (8.6.16-r0)
- (37/37) Installing R (4.5.0-r0)
- Executing R-4.5.0-r0.post-install
- *
- * If you want to install R packages from CRAN that contains native extensions,
- * then you must also install R-dev.
- *
- * To avoid warnings about R.css when installing R extensions also install R-doc.
- *
- Executing busybox-1.37.0-r19.trigger
- Executing glib-2.84.4-r0.trigger
- OK: 405 MiB in 139 packages
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved conf-r.1.0.0 (cached)
-> retrieved dolog.3.0 (cached)
-> installed conf-r.1.0.0
-> retrieved dune.3.20.2 (cached)
-> retrieved ocamlbuild.0.16.1 (cached)
-> retrieved ocamlfind.1.9.8 (cached)
-> retrieved orrandomForest.1.0.0 (cached)
-> installed ocamlfind.1.9.8
-> installed ocamlbuild.0.16.1
-> installed dolog.3.0
-> installed dune.3.20.2
[ERROR] The compilation of orrandomForest.1.0.0 failed at "jbuilder build -p orrandomForest -j 255".
#=== ERROR while compiling orrandomForest.1.0.0 ===============================#
# context 2.5.0~alpha1 | linux/x86_64 | ocaml-base-compiler.4.14.2 | pinned(https://github.com/UnixJunkie/orrandomForest/archive/v1.0.0.tar.gz)
# path ~/.opam/4.14/.opam-switch/build/orrandomForest.1.0.0
# command ~/.opam/opam-init/hooks/sandbox.sh build jbuilder build -p orrandomForest -j 255
# exit-code 10
# env-file ~/.opam/log/orrandomForest-7-d6c023.env
# output-file ~/.opam/log/orrandomForest-7-d6c023.out
### output ###
# [ERROR] Command not found: jbuilder
<><> Error report <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><>
+- The following actions failed
| - build orrandomForest 1.0.0
+-
+- The following changes have been performed
| - install conf-r 1.0.0
| - install dolog 3.0
| - install dune 3.20.2
| - install ocamlbuild 0.16.1
| - install ocamlfind 1.9.8
+-
<><> orrandomForest.1.0.0 troubleshooting <><><><><><><><><><><><><><><><><><><>
=> Please interact with R to install needed things in user-space:
R
install.packages('Marix', repos='http://cran.r-project.org')
install.packages('randomForest', repos='http://cran.r-project.org')
# To update the current shell environment, run: eval $(opam env)
The former state can be restored with:
/usr/bin/opam switch import "/home/opam/.opam/4.14/.opam-switch/backup/state-20251110125438.export"
[WARNING] OPAMCONFIRMLEVEL was ignored because CLI 2.0 was requested and it was introduced in 2.1.
[WARNING] OPAMCONFIRMLEVEL was ignored because CLI 2.0 was requested and it was introduced in 2.1.
"/usr/bin/env" "bash" "-c" "opam reinstall orrandomForest.1.0.0;
res=$?;
test "$res" != 31 && exit "$res";
export OPAMCLI=2.0;
build_dir=$(opam var prefix)/.opam-switch/build;
failed=$(ls "$build_dir");
partial_fails="";
for pkg in $failed; do
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"alpine-3.22\""; then
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.";
fi;
test "$pkg" != 'orrandomForest.1.0.0' && partial_fails="$partial_fails $pkg";
done;
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}";
exit 1" failed with exit status 1
2025-11-10 12:55.47: Job failed: Failed: Build failed
2025-11-10 12:55.47: Log analysis:
2025-11-10 12:55.47: >>>
[ERROR] The compilation of orrandomForest.1.0.0 failed at "jbuilder build -p orrandomForest -j 255".
(score = 20)
2025-11-10 12:55.47: The compilation of orrandomForest.1.0.0 failed at "jbuilder build -p orrandomForest -j 255".