(for PR #24267)
2025-10-17 13:54.21: New job: build oplsr.8.0.1, using opam dev
from https://github.com/ocaml/opam-repository.git#refs/pull/24267/head (41de505ec8ff3637ab3cb06a41ccbc29683f566c)
on centos-10-ocaml-4.14/amd64
To reproduce locally:
cd $(mktemp -d)
git clone --recursive "https://github.com/ocaml/opam-repository.git" && cd "opam-repository" && git fetch origin "refs/pull/24267/head" && git reset --hard 41de505e
git fetch origin master
git merge --no-edit 5bf570252bd9fee71938b828ca0b86573c1e3355
cat > ../Dockerfile <<'END-OF-DOCKERFILE'
FROM ocaml/opam:centos-10-ocaml-4.14@sha256:52261b5a76e83b24d439cfe7fda228ef69fd48a11530a5b4787db6aab0dd48f8
USER 1000:1000
WORKDIR /home/opam
RUN sudo ln -f /usr/bin/opam-dev /usr/bin/opam
RUN opam init --reinit -ni
RUN opam option solver=builtin-0install && opam config report
ENV OPAMDOWNLOADJOBS="1"
ENV OPAMERRLOGLEN="0"
ENV OPAMPRECISETRACKING="1"
ENV CI="true"
ENV OPAM_REPO_CI="true"
RUN rm -rf opam-repository/
COPY --chown=1000:1000 . opam-repository/
RUN opam repository set-url --strict default opam-repository/
RUN opam update --depexts || true
RUN opam pin add -k version -yn oplsr.8.0.1 8.0.1
RUN opam reinstall oplsr.8.0.1; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"centos-10\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'oplsr.8.0.1' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
END-OF-DOCKERFILE
docker build -f ../Dockerfile .
2025-10-17 13:54.21: Using cache hint "ocaml/opam:centos-10-ocaml-4.14@sha256:52261b5a76e83b24d439cfe7fda228ef69fd48a11530a5b4787db6aab0dd48f8-oplsr.8.0.1-41de505ec8ff3637ab3cb06a41ccbc29683f566c"
2025-10-17 13:54.21: Using OBuilder spec:
((from ocaml/opam:centos-10-ocaml-4.14@sha256:52261b5a76e83b24d439cfe7fda228ef69fd48a11530a5b4787db6aab0dd48f8)
(user (uid 1000) (gid 1000))
(workdir /home/opam)
(run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
(run (network host)
(shell "opam init --reinit --config .opamrc-sandbox -ni"))
(run (shell "opam option solver=builtin-0install && opam config report"))
(env OPAMDOWNLOADJOBS 1)
(env OPAMERRLOGLEN 0)
(env OPAMPRECISETRACKING 1)
(env CI true)
(env OPAM_REPO_CI true)
(run (shell "rm -rf opam-repository/"))
(copy (src .) (dst opam-repository/))
(run (shell "opam repository set-url --strict default opam-repository/"))
(run (network host)
(shell "opam update --depexts || true"))
(run (shell "opam pin add -k version -yn oplsr.8.0.1 8.0.1"))
(run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall oplsr.8.0.1;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"centos-10\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'oplsr.8.0.1' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
)
2025-10-17 13:54.21: Connecting to build cluster…
2025-10-17 13:54.21: Waiting for resource in pool OCluster
2025-10-17 14:11.02: Waiting for worker…
2025-10-17 14:13.06: Got resource from pool OCluster
Building on laodoke.caelum.ci.dev
All commits already cached
HEAD is now at 5bf570252b Merge pull request #28700 from drjdn/opam-publish-p5scm.0.5.0
Merge made by the 'ort' strategy.
packages/odnnr/odnnr.2.0.0/opam | 4 +---
packages/oplsr/oplsr.8.0.1/opam | 3 +--
packages/orrandomForest/orrandomForest.1.0.0/opam | 5 +----
packages/orrandomForest/orrandomForest.2.0.1/opam | 7 +------
packages/orrandomForest/orrandomForest.3.0.0/opam | 7 +------
packages/orsvm_e1071/orsvm_e1071.2.0.0/opam | 3 ---
packages/orsvm_e1071/orsvm_e1071.3.0.0/opam | 5 +----
packages/orsvm_e1071/orsvm_e1071.3.0.1/opam | 2 +-
packages/orsvm_e1071/orsvm_e1071.3.0.2/opam | 2 +-
packages/orsvm_e1071/orsvm_e1071.4.0.0/opam | 2 +-
packages/orxgboost/orxgboost.1.0.1/opam | 5 +----
packages/orxgboost/orxgboost.1.1.0/opam | 5 +----
packages/orxgboost/orxgboost.1.2.0/opam | 5 +----
13 files changed, 12 insertions(+), 43 deletions(-)
(from ocaml/opam:centos-10-ocaml-4.14@sha256:52261b5a76e83b24d439cfe7fda228ef69fd48a11530a5b4787db6aab0dd48f8)
Unable to find image 'ocaml/opam:centos-10-ocaml-4.14@sha256:52261b5a76e83b24d439cfe7fda228ef69fd48a11530a5b4787db6aab0dd48f8' locally
docker.io/ocaml/opam@sha256:52261b5a76e83b24d439cfe7fda228ef69fd48a11530a5b4787db6aab0dd48f8: Pulling from ocaml/opam
39c466a5ce5b: Pulling fs layer
39c466a5ce5b: Waiting
39c466a5ce5b: Verifying Checksum
39c466a5ce5b: Download complete
39c466a5ce5b: Pull complete
Digest: sha256:52261b5a76e83b24d439cfe7fda228ef69fd48a11530a5b4787db6aab0dd48f8
Status: Downloaded newer image for ocaml/opam@sha256:52261b5a76e83b24d439cfe7fda228ef69fd48a11530a5b4787db6aab0dd48f8
2025-10-17 14:13.18 ---> using "b4b6913ac9d588223017551523c2f363369e5e7f74c1d24afa496ab4ef1b6c2e" from cache
/: (user (uid 1000) (gid 1000))
/: (workdir /home/opam)
/home/opam: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
2025-10-17 14:13.18 ---> using "99b0f57ea9eb39a1dbc3172d0de2bd8f357eeea20d456915a1864c662b56173c" from cache
/home/opam: (run (network host)
(shell "opam init --reinit --config .opamrc-sandbox -ni"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
This version of opam requires an update to the layout of /home/opam/.opam from version 2.0 to version 2.2, which can't be reverted.
You may want to back it up before going further.
Continue? [Y/n] y
Format upgrade done.
<><> Updating repositories ><><><><><><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
2025-10-17 14:13.18 ---> using "b8aff81524c19c926bf91c8ca6ec30ad20ed1067a777a6c5e321a287ed3f5c08" from cache
/home/opam: (run (shell "opam option solver=builtin-0install && opam config report"))
Set to 'builtin-0install' the field solver in global configuration
# opam config report
# opam-version 2.4.1
# self-upgrade no
# system arch=x86_64 os=linux os-distribution=centos os-version=10
# solver builtin-0install
# install-criteria -changed,-count[avoid-version,solution]
# upgrade-criteria -count[avoid-version,solution]
# jobs 71
# repositories 1 (version-controlled)
# pinned 1 (version)
# current-switch 4.14
# invariant ["ocaml-base-compiler" {= "4.14.2"}]
# compiler-packages ocaml-base-compiler.4.14.2, ocaml-options-vanilla.1
# ocaml:native true
# ocaml:native-tools true
# ocaml:native-dynlink true
# ocaml:stubsdir /home/opam/.opam/4.14/lib/ocaml/stublibs:/home/opam/.opam/4.14/lib/ocaml
# ocaml:preinstalled false
# ocaml:compiler 4.14.2
2025-10-17 14:13.18 ---> using "b4fdbaf9c4dc750037c40f018da29f7d51b21fe06eee10a28d5e64a64a098d3e" from cache
/home/opam: (env OPAMDOWNLOADJOBS 1)
/home/opam: (env OPAMERRLOGLEN 0)
/home/opam: (env OPAMPRECISETRACKING 1)
/home/opam: (env CI true)
/home/opam: (env OPAM_REPO_CI true)
/home/opam: (run (shell "rm -rf opam-repository/"))
2025-10-17 14:13.18 ---> using "5e9a30b5524c690dd7f53006b0c04a937975235a592960dd471af95f1d8905f0" from cache
/home/opam: (copy (src .) (dst opam-repository/))
2025-10-17 14:13.19 ---> using "244452eb776330d9a43b5db030df8584db58789303c80628a4ed00c9e77385da" from cache
/home/opam: (run (shell "opam repository set-url --strict default opam-repository/"))
[default] Initialised
2025-10-17 14:13.36 ---> saved as "660332c47223dc9aec3037e5eaa7191db6879ab3b7f4de2283d1d5bc125e469a"
/home/opam: (run (network host)
(shell "opam update --depexts || true"))
+ /usr/bin/sudo "yum" "makecache"
- CentOS Stream 10 - BaseOS 100 kB/s | 15 kB 00:00
- CentOS Stream 10 - AppStream 142 kB/s | 15 kB 00:00
- CentOS Stream 10 - CRB 138 kB/s | 15 kB 00:00
- CentOS Stream 10 - Extras packages 161 kB/s | 17 kB 00:00
- Metadata cache created.
2025-10-17 14:13.37 ---> saved as "b73b7ac0bb8010a8e61302742be6a51b19eeebe3746f52fcfd313bda3427a181"
/home/opam: (run (shell "opam pin add -k version -yn oplsr.8.0.1 8.0.1"))
oplsr is now pinned to version 8.0.1
2025-10-17 14:13.37 ---> saved as "b809ca32c7465e2ba999c262b90f4e0466a9d94acb2af24af903fb6370aac1bd"
/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall oplsr.8.0.1;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"centos-10\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'oplsr.8.0.1' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
oplsr.8.0.1 is not installed. Install it? [Y/n] y
The following actions will be performed:
=== install 14 packages
- install batteries 3.10.0 [required by oplsr]
- install camlp-streams 5.0.1 [required by batteries]
- install conf-autoconf 0.2 [required by cpu]
- install conf-gnuplot 0.1 [required by oplsr]
- install conf-r 1.0.0 [required by oplsr]
- install cpm 12.2.0 [required by oplsr]
- install cpu 2.0.0 [required by parany]
- install dolog 6.0.0 [required by oplsr]
- install dune 3.20.2 [required by oplsr]
- install minicli 5.0.2 [required by oplsr]
- install num 1.6 [required by batteries]
- install ocamlfind 1.9.8 [required by batteries]
- install oplsr 8.0.1 (pinned)
- install parany 14.0.1 [required by oplsr]
The following system packages will first need to be installed:
epel-release gnuplot R
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run yum to install them (may need root/sudo access)
2. Display the recommended yum command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/bin/sudo "yum" "install" "-y" "epel-release"
- Last metadata expiration check: 0:00:04 ago on Fri Oct 17 14:13:37 2025.
- Dependencies resolved.
- ================================================================================
- Package Arch Version Repository Size
- ================================================================================
- Installing:
- epel-release noarch 10-5.el10s extras-common 18 k
- Installing weak dependencies:
- dnf-plugins-core noarch 4.7.0-9.el10 baseos 44 k
-
- Transaction Summary
- ================================================================================
- Install 2 Packages
-
- Total download size: 62 k
- Installed size: 47 k
- Downloading Packages:
- (1/2): epel-release-10-5.el10s.noarch.rpm 878 kB/s | 18 kB 00:00
- (2/2): dnf-plugins-core-4.7.0-9.el10.noarch.rpm 1.4 MB/s | 44 kB 00:00
- --------------------------------------------------------------------------------
- Total 239 kB/s | 62 kB 00:00
- CentOS Stream 10 - Extras packages 2.1 MB/s | 2.1 kB 00:00
- Importing GPG key 0x1D997668:
- Userid : "CentOS Extras SIG (https://wiki.centos.org/SpecialInterestGroup) <security@centos.org>"
- Fingerprint: 363F C097 2F64 B699 AED3 968E 1FF6 A217 1D99 7668
- From : /etc/pki/rpm-gpg/RPM-GPG-KEY-CentOS-SIG-Extras-SHA512
- warning: Certificate 1FF6A2171D997668:
- Policy rejects subkey 8B5C8111FCA5D0FF: Policy rejected non-revocation signature (PrimaryKeyBinding) requiring second pre-image resistance
- Key imported successfully
- Running transaction check
- Transaction check succeeded.
- Running transaction test
- Transaction test succeeded.
- Running transaction
- Preparing : 1/1
- Installing : dnf-plugins-core-4.7.0-9.el10.noarch 1/2
- Installing : epel-release-10-5.el10s.noarch 2/2
- Running scriptlet: epel-release-10-5.el10s.noarch 2/2
- Many EPEL packages require the CodeReady Builder (CRB) repository.
- It is recommended that you run /usr/bin/crb enable to enable the CRB repository.
-
-
- Installed:
- dnf-plugins-core-4.7.0-9.el10.noarch epel-release-10-5.el10s.noarch
-
- Complete!
+ /usr/bin/sudo "yum" "install" "-y" "R" "gnuplot"
- Extra Packages for Enterprise Linux 10 - x86_64 14 MB/s | 5.6 MB 00:00
- Last metadata expiration check: 0:00:03 ago on Fri Oct 17 14:13:42 2025.
- No match for argument: gnuplot
- Error: Unable to find a match: gnuplot
[ERROR] System package install failed with exit code 1 at command:
sudo yum install -y R gnuplot
[ERROR] These packages are still missing: epel-release gnuplot R
[NOTE] You can retry with '--assume-depexts' to skip this check, or run 'opam option depext=false' to permanently disable handling of system packages.
"/usr/bin/env" "bash" "-c" "opam reinstall oplsr.8.0.1;
res=$?;
test "$res" != 31 && exit "$res";
export OPAMCLI=2.0;
build_dir=$(opam var prefix)/.opam-switch/build;
failed=$(ls "$build_dir");
partial_fails="";
for pkg in $failed; do
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"centos-10\""; then
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.";
fi;
test "$pkg" != 'oplsr.8.0.1' && partial_fails="$partial_fails $pkg";
done;
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}";
exit 1" failed with exit status 10
2025-10-17 14:13.54: Job failed: Failed: Build failed
2025-10-17 14:13.54: Log analysis:
2025-10-17 14:13.54: >>>
[ERROR] System package install failed with exit code 1 at command:
(score = 20)
2025-10-17 14:13.54: >>>
[ERROR] These packages are still missing: epel-release gnuplot R
(score = 20)
2025-10-17 14:13.54: System package install failed with exit code 1 at command: