- github
- ocaml
- opam-repository
- 4b271a
- compilers,4.14,dokeysto_camltc.4.0.2,revdeps,rankers.2.0.7
(not at the head of any monitored branch or PR)
2025-09-22 13:20.12: New job: test rankers.2.0.7 with dokeysto_camltc.4.0.2, using opam dev
from https://github.com/ocaml/opam-repository.git#refs/pull/28567/head (4b271a226d755f4f54f1d5d31deb3d22da1ebc54)
on debian-13-ocaml-4.14/amd64
To reproduce locally:
cd $(mktemp -d)
git clone --recursive "https://github.com/ocaml/opam-repository.git" && cd "opam-repository" && git fetch origin "refs/pull/28567/head" && git reset --hard 4b271a22
git fetch origin master
git merge --no-edit 3f21ebe342ce440d9c9142ffe1185d8e5a326085
cat > ../Dockerfile <<'END-OF-DOCKERFILE'
FROM ocaml/opam:debian-13-ocaml-4.14@sha256:ce7583a4463e517dda39f02d53e6fd4065fe70d94a26e5f51dcceb761272b5dc
USER 1000:1000
WORKDIR /home/opam
RUN sudo ln -f /usr/bin/opam-dev /usr/bin/opam
RUN opam init --reinit -ni
RUN opam option solver=builtin-0install && opam config report
ENV OPAMDOWNLOADJOBS="1"
ENV OPAMERRLOGLEN="0"
ENV OPAMPRECISETRACKING="1"
ENV CI="true"
ENV OPAM_REPO_CI="true"
RUN rm -rf opam-repository/
COPY --chown=1000:1000 . opam-repository/
RUN opam repository set-url --strict default opam-repository/
RUN opam update --depexts || true
RUN opam pin add -k version -yn dokeysto_camltc.4.0.2 4.0.2
RUN opam reinstall dokeysto_camltc.4.0.2; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-13\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'dokeysto_camltc.4.0.2' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
RUN opam reinstall rankers.2.0.7; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-13\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'rankers.2.0.7' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
RUN (opam reinstall --with-test rankers.2.0.7) || true
RUN opam reinstall --with-test --verbose rankers.2.0.7; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-13\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'rankers.2.0.7' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
END-OF-DOCKERFILE
docker build -f ../Dockerfile .
2025-09-22 13:20.12: Using cache hint "ocaml/opam:debian-13-ocaml-4.14@sha256:ce7583a4463e517dda39f02d53e6fd4065fe70d94a26e5f51dcceb761272b5dc-dokeysto_camltc.4.0.2-rankers.2.0.7-4b271a226d755f4f54f1d5d31deb3d22da1ebc54"
2025-09-22 13:20.12: Using OBuilder spec:
((from ocaml/opam:debian-13-ocaml-4.14@sha256:ce7583a4463e517dda39f02d53e6fd4065fe70d94a26e5f51dcceb761272b5dc)
(user (uid 1000) (gid 1000))
(workdir /home/opam)
(run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
(run (network host)
(shell "opam init --reinit --config .opamrc-sandbox -ni"))
(run (shell "opam option solver=builtin-0install && opam config report"))
(env OPAMDOWNLOADJOBS 1)
(env OPAMERRLOGLEN 0)
(env OPAMPRECISETRACKING 1)
(env CI true)
(env OPAM_REPO_CI true)
(run (shell "rm -rf opam-repository/"))
(copy (src .) (dst opam-repository/))
(run (shell "opam repository set-url --strict default opam-repository/"))
(run (network host)
(shell "opam update --depexts || true"))
(run (shell "opam pin add -k version -yn dokeysto_camltc.4.0.2 4.0.2"))
(run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall dokeysto_camltc.4.0.2;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'dokeysto_camltc.4.0.2' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
(run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall rankers.2.0.7;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'rankers.2.0.7' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
(run (network host)
(shell "(opam reinstall --with-test rankers.2.0.7) || true"))
(run (shell "opam reinstall --with-test --verbose rankers.2.0.7;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'rankers.2.0.7' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
)
2025-09-22 13:20.12: Waiting for resource in pool OCluster
2025-09-22 13:20.12: Waiting for worker…
2025-09-22 13:20.17: Got resource from pool OCluster
Building on toxis.caelum.ci.dev
All commits already cached
Updating files: 77% (14213/18315)
Updating files: 78% (14286/18315)
Updating files: 79% (14469/18315)
Updating files: 80% (14652/18315)
Updating files: 81% (14836/18315)
Updating files: 82% (15019/18315)
Updating files: 83% (15202/18315)
Updating files: 84% (15385/18315)
Updating files: 85% (15568/18315)
Updating files: 86% (15751/18315)
Updating files: 87% (15935/18315)
Updating files: 88% (16118/18315)
Updating files: 89% (16301/18315)
Updating files: 90% (16484/18315)
Updating files: 91% (16667/18315)
Updating files: 92% (16850/18315)
Updating files: 93% (17033/18315)
Updating files: 94% (17217/18315)
Updating files: 95% (17400/18315)
Updating files: 96% (17583/18315)
Updating files: 97% (17766/18315)
Updating files: 98% (17949/18315)
Updating files: 99% (18132/18315)
Updating files: 100% (18315/18315)
Updating files: 100% (18315/18315), done.
HEAD is now at 3f21ebe342 Merge pull request #28544 from vouillon/opam-publish-re.1.14.0
Updating 3f21ebe342..4b271a226d
Fast-forward
packages/dokeysto/dokeysto.4.0.2/opam | 27 +++++++++++++++++++++
.../dokeysto_camltc/dokeysto_camltc.4.0.2/opam | 26 ++++++++++++++++++++
packages/dokeysto_lz4/dokeysto_lz4.4.0.2/opam | 28 ++++++++++++++++++++++
3 files changed, 81 insertions(+)
create mode 100644 packages/dokeysto/dokeysto.4.0.2/opam
create mode 100644 packages/dokeysto_camltc/dokeysto_camltc.4.0.2/opam
create mode 100644 packages/dokeysto_lz4/dokeysto_lz4.4.0.2/opam
(from ocaml/opam:debian-13-ocaml-4.14@sha256:ce7583a4463e517dda39f02d53e6fd4065fe70d94a26e5f51dcceb761272b5dc)
Unable to find image 'ocaml/opam:debian-13-ocaml-4.14@sha256:ce7583a4463e517dda39f02d53e6fd4065fe70d94a26e5f51dcceb761272b5dc' locally
docker.io/ocaml/opam@sha256:ce7583a4463e517dda39f02d53e6fd4065fe70d94a26e5f51dcceb761272b5dc: Pulling from ocaml/opam
15b1d8a5ff03: Already exists
4d5eb3ed0208: Already exists
b44e00377829: Already exists
93018e586176: Already exists
587e432a29e2: Already exists
cdf304204754: Already exists
a444cfe202e3: Already exists
964991c828c0: Already exists
a94458d90f79: Already exists
e972c69afbc9: Already exists
3997d62e9de2: Already exists
d78ea61f72f9: Already exists
c68a1176424c: Already exists
63495b383f1a: Already exists
aa1a6204320d: Already exists
187b2023e0b3: Already exists
4787e66ddf43: Already exists
973a552bac2d: Already exists
8ad831d15267: Already exists
a8377bc33a29: Already exists
84a002321686: Already exists
4f4fb700ef54: Already exists
5d52c4f201d6: Already exists
68ef19bc296a: Already exists
1cda2aa0af1b: Already exists
769f31bcfe07: Already exists
b1d715eb0b34: Already exists
6b92d559de80: Already exists
1552f16d9075: Already exists
7a69328970da: Already exists
e66b1fc86e6f: Already exists
b14737f10b30: Already exists
4b7cf33f8dea: Already exists
0499d18bfcaa: Already exists
fb0e4a52e51b: Already exists
af1ea896d29c: Already exists
cff41317f198: Already exists
fbb90a49a8ca: Already exists
2f7f155032eb: Already exists
02f68e1ce660: Already exists
ecccefc40725: Pulling fs layer
b3c55c49d7c7: Pulling fs layer
086c23210c52: Pulling fs layer
be64ebf82eb2: Pulling fs layer
be64ebf82eb2: Waiting
b3c55c49d7c7: Download complete
086c23210c52: Verifying Checksum
086c23210c52: Download complete
be64ebf82eb2: Verifying Checksum
be64ebf82eb2: Download complete
ecccefc40725: Verifying Checksum
ecccefc40725: Download complete
ecccefc40725: Pull complete
b3c55c49d7c7: Pull complete
086c23210c52: Pull complete
be64ebf82eb2: Pull complete
Digest: sha256:ce7583a4463e517dda39f02d53e6fd4065fe70d94a26e5f51dcceb761272b5dc
Status: Downloaded newer image for ocaml/opam@sha256:ce7583a4463e517dda39f02d53e6fd4065fe70d94a26e5f51dcceb761272b5dc
2025-09-22 13:20.20 ---> using "f2c15438f4e8107ac42e1adfbd29c5c483ff0e5aaf05ff1291b0b30470c339be" from cache
/: (user (uid 1000) (gid 1000))
/: (workdir /home/opam)
/home/opam: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
2025-09-22 13:20.20 ---> using "8e4815ff6b482deb2badd55f707e4331a2daf52d1f97e062604f979853124597" from cache
/home/opam: (run (network host)
(shell "opam init --reinit --config .opamrc-sandbox -ni"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
Continue? [Y/n] y
This version of opam requires an update to the layout of /home/opam/.opam from version 2.0 to version 2.2, which can't be reverted.
You may want to back it up before going further.
Format upgrade done.
<><> Updating repositories ><><><><><><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
2025-09-22 13:20.20 ---> using "0309994c25db3359b71c182dd526d9cd4b87f08f6fd345755107482f61709ee3" from cache
/home/opam: (run (shell "opam option solver=builtin-0install && opam config report"))
Set to 'builtin-0install' the field solver in global configuration
# opam config report
# opam-version 2.4.1
# self-upgrade no
# system arch=x86_64 os=linux os-distribution=debian os-version=13
# solver builtin-0install
# install-criteria -changed,-count[avoid-version,solution]
# upgrade-criteria -count[avoid-version,solution]
# jobs 71
# repositories 1 (version-controlled)
# pinned 1 (version)
# current-switch 4.14
# invariant ["ocaml-base-compiler" {= "4.14.2"}]
# compiler-packages ocaml-base-compiler.4.14.2, ocaml-options-vanilla.1
# ocaml:native true
# ocaml:native-tools true
# ocaml:native-dynlink true
# ocaml:stubsdir /home/opam/.opam/4.14/lib/ocaml/stublibs:/home/opam/.opam/4.14/lib/ocaml
# ocaml:preinstalled false
# ocaml:compiler 4.14.2
2025-09-22 13:20.20 ---> using "01960dce876bd083c0e115ca8b857f355a6f4a5b1589bc70acef12378d72e36e" from cache
/home/opam: (env OPAMDOWNLOADJOBS 1)
/home/opam: (env OPAMERRLOGLEN 0)
/home/opam: (env OPAMPRECISETRACKING 1)
/home/opam: (env CI true)
/home/opam: (env OPAM_REPO_CI true)
/home/opam: (run (shell "rm -rf opam-repository/"))
2025-09-22 13:20.20 ---> using "88d8ec224acefa159471a25872197bf5efdd28e8b95159888107feac1f31a583" from cache
/home/opam: (copy (src .) (dst opam-repository/))
2025-09-22 13:20.21 ---> using "d4d9f2f1615d621ab1f688a67a36bfde3911dbcb071ff8972d0b1e89427068eb" from cache
/home/opam: (run (shell "opam repository set-url --strict default opam-repository/"))
[default] Initialised
2025-09-22 13:20.21 ---> using "663c233cc5d3bf68284b26c004b0de1e6b90f5735519d3408e8bb011facf8863" from cache
/home/opam: (run (network host)
(shell "opam update --depexts || true"))
+ /usr/bin/sudo "apt-get" "update"
- Hit:1 http://deb.debian.org/debian trixie InRelease
- Get:2 http://deb.debian.org/debian trixie-updates InRelease [47.3 kB]
- Get:3 http://deb.debian.org/debian-security trixie-security InRelease [43.4 kB]
- Get:4 http://deb.debian.org/debian-security trixie-security/main amd64 Packages [44.3 kB]
- Fetched 135 kB in 0s (1589 kB/s)
- Reading package lists...
2025-09-22 13:20.21 ---> using "007836170feb169593760a81d77b021f6b9f9e546215b0d4388a0f5d55b16d0f" from cache
/home/opam: (run (shell "opam pin add -k version -yn dokeysto_camltc.4.0.2 4.0.2"))
dokeysto_camltc is now pinned to version 4.0.2
2025-09-22 13:20.23 ---> saved as "24b988640332566bb9f6ac5e46b62d74144e286011eb6babd1d0aa6cc1cb27ed"
/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall dokeysto_camltc.4.0.2;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'dokeysto_camltc.4.0.2' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
dokeysto_camltc.4.0.2 is not installed. Install it? [Y/n] y
The following actions will be performed:
=== install 21 packages
- install base-bytes base [required by dokeysto]
- install camltc 0.9.8 [required by dokeysto_camltc]
- install conf-bash 1 [required by camltc]
- install cppo 1.8.0 [required by lwt]
- install csexp 1.5.2 [required by dune-configurator]
- install dokeysto 4.0.2 [required by dokeysto_camltc]
- install dokeysto_camltc 4.0.2 (pinned)
- install dune 3.20.2 [required by dokeysto_camltc]
- install dune-configurator 3.20.2 [required by extunix]
- install extunix 0.4.4 [required by dokeysto]
- install logs 0.9.0 [required by camltc]
- install lwt 5.9.2 [required by camltc]
- install ocaml-compiler-libs v0.12.4 [required by ppxlib]
- install ocamlbuild 0.16.1 [required by logs]
- install ocamlfind 1.9.8 [required by logs]
- install ocplib-endian 1.2 [required by lwt]
- install ppx_derivers 1.2.1 [required by ppxlib]
- install ppxlib 0.36.0 [required by extunix]
- install sexplib0 v0.17.0 [required by ppxlib]
- install stdlib-shims 0.3.0 [required by ppxlib]
- install topkg 1.1.0 [required by logs]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved camltc.0.9.8 (cached)
-> retrieved cppo.1.8.0 (cached)
-> installed conf-bash.1
-> retrieved csexp.1.5.2 (cached)
-> retrieved dokeysto.4.0.2, dokeysto_camltc.4.0.2 (cached)
-> retrieved dune.3.20.2, dune-configurator.3.20.2 (cached)
-> retrieved extunix.0.4.4 (cached)
-> retrieved logs.0.9.0 (cached)
-> retrieved lwt.5.9.2 (cached)
-> retrieved ocaml-compiler-libs.v0.12.4 (cached)
-> retrieved ocamlbuild.0.16.1 (cached)
-> retrieved ocamlfind.1.9.8 (cached)
-> retrieved ocplib-endian.1.2 (cached)
-> retrieved ppx_derivers.1.2.1 (cached)
-> retrieved ppxlib.0.36.0 (cached)
-> retrieved sexplib0.v0.17.0 (cached)
-> retrieved stdlib-shims.0.3.0 (cached)
-> retrieved topkg.1.1.0 (cached)
-> installed ocamlfind.1.9.8
-> installed base-bytes.base
-> installed ocamlbuild.0.16.1
-> installed topkg.1.1.0
-> installed dune.3.20.2
-> installed ppx_derivers.1.2.1
-> installed csexp.1.5.2
-> installed cppo.1.8.0
-> installed ocaml-compiler-libs.v0.12.4
-> installed sexplib0.v0.17.0
-> installed stdlib-shims.0.3.0
-> installed ocplib-endian.1.2
-> installed dune-configurator.3.20.2
-> installed lwt.5.9.2
-> installed logs.0.9.0
-> installed camltc.0.9.8
-> installed ppxlib.0.36.0
-> installed extunix.0.4.4
-> installed dokeysto.4.0.2
-> installed dokeysto_camltc.4.0.2
Done.
# To update the current shell environment, run: eval $(opam env)
2025-09-22 13:22.19 ---> saved as "82587076bb6e47c10d03f889016a94db037eb9589f8fa4e76a9e1d3672ceea3d"
/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall rankers.2.0.7;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'rankers.2.0.7' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
rankers.2.0.7 is not installed. Install it? [Y/n] y
The following actions will be performed:
=== install 25 packages
- install batteries 3.9.0 [required by rankers]
- install bst 7.1.0 [required by rankers]
- install camlp-streams 5.0.1 [required by batteries]
- install conf-autoconf 0.2 [required by cpu]
- install conf-gnuplot 0.1 [required by rankers]
- install conf-graphviz 0.1 [required by molenc]
- install conf-nlopt 1 [required by nlopt]
- install conf-pkg-config 4 [required by conf-nlopt]
- install conf-python-3 9.0.0 [required by molenc]
- install conf-rdkit 1 [required by molenc]
- install cpm 12.2.0 [required by rankers]
- install cpu 2.0.0 [required by parany]
- install dolog 6.0.0 [required by rankers]
- install line_oriented 1.3.0 [required by molenc]
- install minicli 5.0.2 [required by rankers]
- install molenc 16.13.0 [required by rankers]
- install nlopt 0.7.0 [required by nlopt-ocaml]
- install nlopt-ocaml transition [required by rankers]
- install num 1.6 [required by batteries]
- install ocamlgraph 2.2.0 [required by molenc]
- install parany 12.2.2 [required by rankers]
- install pyml 20250807 [required by molenc]
- install rankers 2.0.7
- install stdcompat 21.1 [required by pyml]
- install vector3 1.0.0 [required by molenc]
The following system packages will first need to be installed:
autoconf gnuplot-x11 graphviz libnlopt-dev librdkit-dev pkg-config python3 python3-rdkit
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run apt-get to install them (may need root/sudo access)
2. Display the recommended apt-get command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "autoconf" "gnuplot-x11" "graphviz" "libnlopt-dev" "librdkit-dev" "pkg-config" "python3" "python3-rdkit"
- Preconfiguring packages ...
- Selecting previously unselected package libsystemd-shared:amd64.
- (Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 20622 files and directories currently installed.)
- Preparing to unpack .../libsystemd-shared_257.8-1~deb13u2_amd64.deb ...
- Unpacking libsystemd-shared:amd64 (257.8-1~deb13u2) ...
- Setting up libsystemd-shared:amd64 (257.8-1~deb13u2) ...
- Selecting previously unselected package systemd.
- (Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 20630 files and directories currently installed.)
- Preparing to unpack .../systemd_257.8-1~deb13u2_amd64.deb ...
- Unpacking systemd (257.8-1~deb13u2) ...
- Setting up systemd (257.8-1~deb13u2) ...
- Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' → '/usr/lib/systemd/system/getty@.service'.
- Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' → '/usr/lib/systemd/system/remote-fs.target'.
- Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' → '/usr/lib/systemd/system/systemd-pstore.service'.
- Initializing machine ID from random generator.
- Creating group 'systemd-journal' with GID 999.
- Creating group 'systemd-network' with GID 998.
- Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998.
- /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring.
- Selecting previously unselected package systemd-sysv.
- (Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 21563 files and directories currently installed.)
- Preparing to unpack .../0-systemd-sysv_257.8-1~deb13u2_amd64.deb ...
- Unpacking systemd-sysv (257.8-1~deb13u2) ...
- Selecting previously unselected package libdbus-1-3:amd64.
- Preparing to unpack .../1-libdbus-1-3_1.16.2-2_amd64.deb ...
- Unpacking libdbus-1-3:amd64 (1.16.2-2) ...
- Selecting previously unselected package dbus-bin.
- Preparing to unpack .../2-dbus-bin_1.16.2-2_amd64.deb ...
- Unpacking dbus-bin (1.16.2-2) ...
- Selecting previously unselected package dbus-session-bus-common.
- Preparing to unpack .../3-dbus-session-bus-common_1.16.2-2_all.deb ...
- Unpacking dbus-session-bus-common (1.16.2-2) ...
- Selecting previously unselected package dbus-daemon.
- Preparing to unpack .../4-dbus-daemon_1.16.2-2_amd64.deb ...
- Unpacking dbus-daemon (1.16.2-2) ...
- Selecting previously unselected package dbus-system-bus-common.
- Preparing to unpack .../5-dbus-system-bus-common_1.16.2-2_all.deb ...
- Unpacking dbus-system-bus-common (1.16.2-2) ...
- Selecting previously unselected package dbus.
- Preparing to unpack .../6-dbus_1.16.2-2_amd64.deb ...
- Unpacking dbus (1.16.2-2) ...
- Selecting previously unselected package libpython3.13-minimal:amd64.
- Preparing to unpack .../7-libpython3.13-minimal_3.13.5-2_amd64.deb ...
- Unpacking libpython3.13-minimal:amd64 (3.13.5-2) ...
- Selecting previously unselected package python3.13-minimal.
- Preparing to unpack .../8-python3.13-minimal_3.13.5-2_amd64.deb ...
- Unpacking python3.13-minimal (3.13.5-2) ...
- Setting up libpython3.13-minimal:amd64 (3.13.5-2) ...
- Setting up python3.13-minimal (3.13.5-2) ...
- Selecting previously unselected package python3-minimal.
- (Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 21980 files and directories currently installed.)
- Preparing to unpack .../0-python3-minimal_3.13.5-1_amd64.deb ...
- Unpacking python3-minimal (3.13.5-1) ...
- Selecting previously unselected package media-types.
- Preparing to unpack .../1-media-types_13.0.0_all.deb ...
- Unpacking media-types (13.0.0) ...
- Selecting previously unselected package readline-common.
- Preparing to unpack .../2-readline-common_8.2-6_all.deb ...
- Unpacking readline-common (8.2-6) ...
- Selecting previously unselected package libreadline8t64:amd64.
- Preparing to unpack .../3-libreadline8t64_8.2-6_amd64.deb ...
- Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
- Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
- Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
- Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
- Unpacking libreadline8t64:amd64 (8.2-6) ...
- Selecting previously unselected package libpython3.13-stdlib:amd64.
- Preparing to unpack .../4-libpython3.13-stdlib_3.13.5-2_amd64.deb ...
- Unpacking libpython3.13-stdlib:amd64 (3.13.5-2) ...
- Selecting previously unselected package python3.13.
- Preparing to unpack .../5-python3.13_3.13.5-2_amd64.deb ...
- Unpacking python3.13 (3.13.5-2) ...
- Selecting previously unselected package libpython3-stdlib:amd64.
- Preparing to unpack .../6-libpython3-stdlib_3.13.5-1_amd64.deb ...
- Unpacking libpython3-stdlib:amd64 (3.13.5-1) ...
- Setting up python3-minimal (3.13.5-1) ...
- Selecting previously unselected package python3.
- (Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 22466 files and directories currently installed.)
- Preparing to unpack .../000-python3_3.13.5-1_amd64.deb ...
- Unpacking python3 (3.13.5-1) ...
- Selecting previously unselected package python3-numpy-dev:amd64.
- Preparing to unpack .../001-python3-numpy-dev_1%3a2.2.4+ds-1_amd64.deb ...
- Unpacking python3-numpy-dev:amd64 (1:2.2.4+ds-1) ...
- Selecting previously unselected package libblas3:amd64.
- Preparing to unpack .../002-libblas3_3.12.1-6_amd64.deb ...
- Unpacking libblas3:amd64 (3.12.1-6) ...
- Selecting previously unselected package libgfortran5:amd64.
- Preparing to unpack .../003-libgfortran5_14.2.0-19_amd64.deb ...
- Unpacking libgfortran5:amd64 (14.2.0-19) ...
- Selecting previously unselected package liblapack3:amd64.
- Preparing to unpack .../004-liblapack3_3.12.1-6_amd64.deb ...
- Unpacking liblapack3:amd64 (3.12.1-6) ...
- Selecting previously unselected package python3-numpy.
- Preparing to unpack .../005-python3-numpy_1%3a2.2.4+ds-1_amd64.deb ...
- Unpacking python3-numpy (1:2.2.4+ds-1) ...
- Selecting previously unselected package libnss-systemd:amd64.
- Preparing to unpack .../006-libnss-systemd_257.8-1~deb13u2_amd64.deb ...
- Unpacking libnss-systemd:amd64 (257.8-1~deb13u2) ...
- Selecting previously unselected package libpam-systemd:amd64.
- Preparing to unpack .../007-libpam-systemd_257.8-1~deb13u2_amd64.deb ...
- Unpacking libpam-systemd:amd64 (257.8-1~deb13u2) ...
- Selecting previously unselected package systemd-timesyncd.
- Preparing to unpack .../008-systemd-timesyncd_257.8-1~deb13u2_amd64.deb ...
- Unpacking systemd-timesyncd (257.8-1~deb13u2) ...
- Selecting previously unselected package libgdk-pixbuf2.0-common.
- Preparing to unpack .../009-libgdk-pixbuf2.0-common_2.42.12+dfsg-4_all.deb ...
- Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-4) ...
- Selecting previously unselected package libglib2.0-0t64:amd64.
- Preparing to unpack .../010-libglib2.0-0t64_2.84.4-3~deb13u1_amd64.deb ...
- Unpacking libglib2.0-0t64:amd64 (2.84.4-3~deb13u1) ...
- Selecting previously unselected package libxml2:amd64.
- Preparing to unpack .../011-libxml2_2.12.7+dfsg+really2.9.14-2.1+deb13u1_amd64.deb ...
- Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-2.1+deb13u1) ...
- Selecting previously unselected package shared-mime-info.
- Preparing to unpack .../012-shared-mime-info_2.4-5+b2_amd64.deb ...
- Unpacking shared-mime-info (2.4-5+b2) ...
- Selecting previously unselected package libjpeg62-turbo:amd64.
- Preparing to unpack .../013-libjpeg62-turbo_1%3a2.1.5-4_amd64.deb ...
- Unpacking libjpeg62-turbo:amd64 (1:2.1.5-4) ...
- Selecting previously unselected package libpng16-16t64:amd64.
- Preparing to unpack .../014-libpng16-16t64_1.6.48-1_amd64.deb ...
- Unpacking libpng16-16t64:amd64 (1.6.48-1) ...
- Selecting previously unselected package libdeflate0:amd64.
- Preparing to unpack .../015-libdeflate0_1.23-2_amd64.deb ...
- Unpacking libdeflate0:amd64 (1.23-2) ...
- Selecting previously unselected package libjbig0:amd64.
- Preparing to unpack .../016-libjbig0_2.1-6.1+b2_amd64.deb ...
- Unpacking libjbig0:amd64 (2.1-6.1+b2) ...
- Selecting previously unselected package liblerc4:amd64.
- Preparing to unpack .../017-liblerc4_4.0.0+ds-5_amd64.deb ...
- Unpacking liblerc4:amd64 (4.0.0+ds-5) ...
- Selecting previously unselected package libsharpyuv0:amd64.
- Preparing to unpack .../018-libsharpyuv0_1.5.0-0.1_amd64.deb ...
- Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ...
- Selecting previously unselected package libwebp7:amd64.
- Preparing to unpack .../019-libwebp7_1.5.0-0.1_amd64.deb ...
- Unpacking libwebp7:amd64 (1.5.0-0.1) ...
- Selecting previously unselected package libtiff6:amd64.
- Preparing to unpack .../020-libtiff6_4.7.0-3_amd64.deb ...
- Unpacking libtiff6:amd64 (4.7.0-3) ...
- Selecting previously unselected package libgdk-pixbuf-2.0-0:amd64.
- Preparing to unpack .../021-libgdk-pixbuf-2.0-0_2.42.12+dfsg-4_amd64.deb ...
- Unpacking libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-4) ...
- Selecting previously unselected package gtk-update-icon-cache.
- Preparing to unpack .../022-gtk-update-icon-cache_4.18.6+ds-2_amd64.deb ...
- No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed.
- No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed.
- Unpacking gtk-update-icon-cache (4.18.6+ds-2) ...
- Selecting previously unselected package hicolor-icon-theme.
- Preparing to unpack .../023-hicolor-icon-theme_0.18-2_all.deb ...
- Unpacking hicolor-icon-theme (0.18-2) ...
- Selecting previously unselected package adwaita-icon-theme.
- Preparing to unpack .../024-adwaita-icon-theme_48.1-1_all.deb ...
- Unpacking adwaita-icon-theme (48.1-1) ...
- Selecting previously unselected package aglfn.
- Preparing to unpack .../025-aglfn_1.7+git20191031.4036a9c-2_all.deb ...
- Unpacking aglfn (1.7+git20191031.4036a9c-2) ...
- Selecting previously unselected package at-spi2-common.
- Preparing to unpack .../026-at-spi2-common_2.56.2-1_all.deb ...
- Unpacking at-spi2-common (2.56.2-1) ...
- Selecting previously unselected package libxi6:amd64.
- Preparing to unpack .../027-libxi6_2%3a1.8.2-1_amd64.deb ...
- Unpacking libxi6:amd64 (2:1.8.2-1) ...
- Selecting previously unselected package libatspi2.0-0t64:amd64.
- Preparing to unpack .../028-libatspi2.0-0t64_2.56.2-1_amd64.deb ...
- Unpacking libatspi2.0-0t64:amd64 (2.56.2-1) ...
- Selecting previously unselected package x11-common.
- Preparing to unpack .../029-x11-common_1%3a7.7+24_all.deb ...
- Unpacking x11-common (1:7.7+24) ...
- Selecting previously unselected package libxtst6:amd64.
- Preparing to unpack .../030-libxtst6_2%3a1.2.5-1_amd64.deb ...
- Unpacking libxtst6:amd64 (2:1.2.5-1) ...
- Selecting previously unselected package dbus-user-session.
- Preparing to unpack .../031-dbus-user-session_1.16.2-2_amd64.deb ...
- Unpacking dbus-user-session (1.16.2-2) ...
- Selecting previously unselected package libdconf1:amd64.
- Preparing to unpack .../032-libdconf1_0.40.0-5_amd64.deb ...
- Unpacking libdconf1:amd64 (0.40.0-5) ...
- Selecting previously unselected package dconf-service.
- Preparing to unpack .../033-dconf-service_0.40.0-5_amd64.deb ...
- Unpacking dconf-service (0.40.0-5) ...
- Selecting previously unselected package dconf-gsettings-backend:amd64.
- Preparing to unpack .../034-dconf-gsettings-backend_0.40.0-5_amd64.deb ...
- Unpacking dconf-gsettings-backend:amd64 (0.40.0-5) ...
- Selecting previously unselected package gsettings-desktop-schemas.
- Preparing to unpack .../035-gsettings-desktop-schemas_48.0-1_all.deb ...
- Unpacking gsettings-desktop-schemas (48.0-1) ...
- Selecting previously unselected package at-spi2-core.
- Preparing to unpack .../036-at-spi2-core_2.56.2-1_amd64.deb ...
- Unpacking at-spi2-core (2.56.2-1) ...
- Selecting previously unselected package m4.
- Preparing to unpack .../037-m4_1.4.19-8_amd64.deb ...
- Unpacking m4 (1.4.19-8) ...
- Selecting previously unselected package autoconf.
- Preparing to unpack .../038-autoconf_2.72-3.1_all.deb ...
- Unpacking autoconf (2.72-3.1) ...
- Selecting previously unselected package autotools-dev.
- Preparing to unpack .../039-autotools-dev_20240727.1_all.deb ...
- Unpacking autotools-dev (20240727.1) ...
- Selecting previously unselected package automake.
- Preparing to unpack .../040-automake_1%3a1.17-4_all.deb ...
- Unpacking automake (1:1.17-4) ...
- Selecting previously unselected package libdevmapper1.02.1:amd64.
- Preparing to unpack .../041-libdevmapper1.02.1_2%3a1.02.205-2_amd64.deb ...
- Unpacking libdevmapper1.02.1:amd64 (2:1.02.205-2) ...
- Selecting previously unselected package dmsetup.
- Preparing to unpack .../042-dmsetup_2%3a1.02.205-2_amd64.deb ...
- Unpacking dmsetup (2:1.02.205-2) ...
- Selecting previously unselected package libfreetype6:amd64.
- Preparing to unpack .../043-libfreetype6_2.13.3+dfsg-1_amd64.deb ...
- Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) ...
- Selecting previously unselected package fonts-dejavu-mono.
- Preparing to unpack .../044-fonts-dejavu-mono_2.37-8_all.deb ...
- Unpacking fonts-dejavu-mono (2.37-8) ...
- Selecting previously unselected package fonts-dejavu-core.
- Preparing to unpack .../045-fonts-dejavu-core_2.37-8_all.deb ...
- Unpacking fonts-dejavu-core (2.37-8) ...
- Selecting previously unselected package fonts-liberation.
- Preparing to unpack .../046-fonts-liberation_1%3a2.1.5-3_all.deb ...
- Unpacking fonts-liberation (1:2.1.5-3) ...
- Selecting previously unselected package fonts-freefont-ttf.
- Preparing to unpack .../047-fonts-freefont-ttf_20211204+svn4273-2_all.deb ...
- Unpacking fonts-freefont-ttf (20211204+svn4273-2) ...
- Selecting previously unselected package fontconfig-config.
- Preparing to unpack .../048-fontconfig-config_2.15.0-2.3_amd64.deb ...
- Unpacking fontconfig-config (2.15.0-2.3) ...
- Selecting previously unselected package libfontconfig1:amd64.
- Preparing to unpack .../049-libfontconfig1_2.15.0-2.3_amd64.deb ...
- Unpacking libfontconfig1:amd64 (2.15.0-2.3) ...
- Selecting previously unselected package fontconfig.
- Preparing to unpack .../050-fontconfig_2.15.0-2.3_amd64.deb ...
- Unpacking fontconfig (2.15.0-2.3) ...
- Selecting previously unselected package fonts-liberation-sans-narrow.
- Preparing to unpack .../051-fonts-liberation-sans-narrow_1%3a1.07.6-4_all.deb ...
- Unpacking fonts-liberation-sans-narrow (1:1.07.6-4) ...
- Selecting previously unselected package gnuplot-data.
- Preparing to unpack .../052-gnuplot-data_6.0.2+dfsg1-1_all.deb ...
- Unpacking gnuplot-data (6.0.2+dfsg1-1) ...
- Selecting previously unselected package libpixman-1-0:amd64.
- Preparing to unpack .../053-libpixman-1-0_0.44.0-3_amd64.deb ...
- Unpacking libpixman-1-0:amd64 (0.44.0-3) ...
- Selecting previously unselected package libxcb-render0:amd64.
- Preparing to unpack .../054-libxcb-render0_1.17.0-2+b1_amd64.deb ...
- Unpacking libxcb-render0:amd64 (1.17.0-2+b1) ...
- Selecting previously unselected package libxcb-shm0:amd64.
- Preparing to unpack .../055-libxcb-shm0_1.17.0-2+b1_amd64.deb ...
- Unpacking libxcb-shm0:amd64 (1.17.0-2+b1) ...
- Selecting previously unselected package libxrender1:amd64.
- Preparing to unpack .../056-libxrender1_1%3a0.9.12-1_amd64.deb ...
- Unpacking libxrender1:amd64 (1:0.9.12-1) ...
- Selecting previously unselected package libcairo2:amd64.
- Preparing to unpack .../057-libcairo2_1.18.4-1+b1_amd64.deb ...
- Unpacking libcairo2:amd64 (1.18.4-1+b1) ...
- Selecting previously unselected package libaom3:amd64.
- Preparing to unpack .../058-libaom3_3.12.1-1_amd64.deb ...
- Unpacking libaom3:amd64 (3.12.1-1) ...
- Selecting previously unselected package libdav1d7:amd64.
- Preparing to unpack .../059-libdav1d7_1.5.1-1_amd64.deb ...
- Unpacking libdav1d7:amd64 (1.5.1-1) ...
- Selecting previously unselected package libabsl20240722:amd64.
- Preparing to unpack .../060-libabsl20240722_20240722.0-4_amd64.deb ...
- Unpacking libabsl20240722:amd64 (20240722.0-4) ...
- Selecting previously unselected package libgav1-1:amd64.
- Preparing to unpack .../061-libgav1-1_0.19.0-3+b1_amd64.deb ...
- Unpacking libgav1-1:amd64 (0.19.0-3+b1) ...
- Selecting previously unselected package librav1e0.7:amd64.
- Preparing to unpack .../062-librav1e0.7_0.7.1-9+b2_amd64.deb ...
- Unpacking librav1e0.7:amd64 (0.7.1-9+b2) ...
- Selecting previously unselected package libsvtav1enc2:amd64.
- Preparing to unpack .../063-libsvtav1enc2_2.3.0+dfsg-1_amd64.deb ...
- Unpacking libsvtav1enc2:amd64 (2.3.0+dfsg-1) ...
- Selecting previously unselected package libyuv0:amd64.
- Preparing to unpack .../064-libyuv0_0.0.1904.20250204-1_amd64.deb ...
- Unpacking libyuv0:amd64 (0.0.1904.20250204-1) ...
- Selecting previously unselected package libavif16:amd64.
- Preparing to unpack .../065-libavif16_1.2.1-1.2_amd64.deb ...
- Unpacking libavif16:amd64 (1.2.1-1.2) ...
- Selecting previously unselected package libheif-plugin-dav1d:amd64.
- Preparing to unpack .../066-libheif-plugin-dav1d_1.19.8-1_amd64.deb ...
- Unpacking libheif-plugin-dav1d:amd64 (1.19.8-1) ...
- Selecting previously unselected package libde265-0:amd64.
- Preparing to unpack .../067-libde265-0_1.0.15-1+b3_amd64.deb ...
- Unpacking libde265-0:amd64 (1.0.15-1+b3) ...
- Selecting previously unselected package libheif-plugin-libde265:amd64.
- Preparing to unpack .../068-libheif-plugin-libde265_1.19.8-1_amd64.deb ...
- Unpacking libheif-plugin-libde265:amd64 (1.19.8-1) ...
- Selecting previously unselected package libheif1:amd64.
- Preparing to unpack .../069-libheif1_1.19.8-1_amd64.deb ...
- Unpacking libheif1:amd64 (1.19.8-1) ...
- Selecting previously unselected package libimagequant0:amd64.
- Preparing to unpack .../070-libimagequant0_2.18.0-1+b2_amd64.deb ...
- Unpacking libimagequant0:amd64 (2.18.0-1+b2) ...
- Selecting previously unselected package libxpm4:amd64.
- Preparing to unpack .../071-libxpm4_1%3a3.5.17-1+b3_amd64.deb ...
- Unpacking libxpm4:amd64 (1:3.5.17-1+b3) ...
- Selecting previously unselected package libgd3:amd64.
- Preparing to unpack .../072-libgd3_2.3.3-13_amd64.deb ...
- Unpacking libgd3:amd64 (2.3.3-13) ...
- Selecting previously unselected package liblua5.4-0:amd64.
- Preparing to unpack .../073-liblua5.4-0_5.4.7-1+b2_amd64.deb ...
- Unpacking liblua5.4-0:amd64 (5.4.7-1+b2) ...
- Selecting previously unselected package libfribidi0:amd64.
- Preparing to unpack .../074-libfribidi0_1.0.16-1_amd64.deb ...
- Unpacking libfribidi0:amd64 (1.0.16-1) ...
- Selecting previously unselected package libgraphite2-3:amd64.
- Preparing to unpack .../075-libgraphite2-3_1.3.14-2+b1_amd64.deb ...
- Unpacking libgraphite2-3:amd64 (1.3.14-2+b1) ...
- Selecting previously unselected package libharfbuzz0b:amd64.
- Preparing to unpack .../076-libharfbuzz0b_10.2.0-1+b1_amd64.deb ...
- Unpacking libharfbuzz0b:amd64 (10.2.0-1+b1) ...
- Selecting previously unselected package libthai-data.
- Preparing to unpack .../077-libthai-data_0.1.29-2_all.deb ...
- Unpacking libthai-data (0.1.29-2) ...
- Selecting previously unselected package libdatrie1:amd64.
- Preparing to unpack .../078-libdatrie1_0.2.13-3+b1_amd64.deb ...
- Unpacking libdatrie1:amd64 (0.2.13-3+b1) ...
- Selecting previously unselected package libthai0:amd64.
- Preparing to unpack .../079-libthai0_0.1.29-2+b1_amd64.deb ...
- Unpacking libthai0:amd64 (0.1.29-2+b1) ...
- Selecting previously unselected package libpango-1.0-0:amd64.
- Preparing to unpack .../080-libpango-1.0-0_1.56.3-1_amd64.deb ...
- Unpacking libpango-1.0-0:amd64 (1.56.3-1) ...
- Selecting previously unselected package libpangoft2-1.0-0:amd64.
- Preparing to unpack .../081-libpangoft2-1.0-0_1.56.3-1_amd64.deb ...
- Unpacking libpangoft2-1.0-0:amd64 (1.56.3-1) ...
- Selecting previously unselected package libpangocairo-1.0-0:amd64.
- Preparing to unpack .../082-libpangocairo-1.0-0_1.56.3-1_amd64.deb ...
- Unpacking libpangocairo-1.0-0:amd64 (1.56.3-1) ...
- Selecting previously unselected package libwebpmux3:amd64.
- Preparing to unpack .../083-libwebpmux3_1.5.0-0.1_amd64.deb ...
- Unpacking libwebpmux3:amd64 (1.5.0-0.1) ...
- Selecting previously unselected package libpcre2-32-0:amd64.
- Preparing to unpack .../084-libpcre2-32-0_10.46-1~deb13u1_amd64.deb ...
- Unpacking libpcre2-32-0:amd64 (10.46-1~deb13u1) ...
- Selecting previously unselected package libwxbase3.2-1t64:amd64.
- Preparing to unpack .../085-libwxbase3.2-1t64_3.2.8+dfsg-2_amd64.deb ...
- Unpacking libwxbase3.2-1t64:amd64 (3.2.8+dfsg-2) ...
- Selecting previously unselected package libcairo-gobject2:amd64.
- Preparing to unpack .../086-libcairo-gobject2_1.18.4-1+b1_amd64.deb ...
- Unpacking libcairo-gobject2:amd64 (1.18.4-1+b1) ...
- Selecting previously unselected package libatk1.0-0t64:amd64.
- Preparing to unpack .../087-libatk1.0-0t64_2.56.2-1_amd64.deb ...
- Unpacking libatk1.0-0t64:amd64 (2.56.2-1) ...
- Selecting previously unselected package libatk-bridge2.0-0t64:amd64.
- Preparing to unpack .../088-libatk-bridge2.0-0t64_2.56.2-1_amd64.deb ...
- Unpacking libatk-bridge2.0-0t64:amd64 (2.56.2-1) ...
- Selecting previously unselected package libcloudproviders0:amd64.
- Preparing to unpack .../089-libcloudproviders0_0.3.6-2_amd64.deb ...
- Unpacking libcloudproviders0:amd64 (0.3.6-2) ...
- Selecting previously unselected package liblcms2-2:amd64.
- Preparing to unpack .../090-liblcms2-2_2.16-2_amd64.deb ...
- Unpacking liblcms2-2:amd64 (2.16-2) ...
- Selecting previously unselected package libcolord2:amd64.
- Preparing to unpack .../091-libcolord2_1.4.7-3_amd64.deb ...
- Unpacking libcolord2:amd64 (1.4.7-3) ...
- Selecting previously unselected package libavahi-common-data:amd64.
- Preparing to unpack .../092-libavahi-common-data_0.8-16_amd64.deb ...
- Unpacking libavahi-common-data:amd64 (0.8-16) ...
- Selecting previously unselected package libavahi-common3:amd64.
- Preparing to unpack .../093-libavahi-common3_0.8-16_amd64.deb ...
- Unpacking libavahi-common3:amd64 (0.8-16) ...
- Selecting previously unselected package libavahi-client3:amd64.
- Preparing to unpack .../094-libavahi-client3_0.8-16_amd64.deb ...
- Unpacking libavahi-client3:amd64 (0.8-16) ...
- Selecting previously unselected package libcups2t64:amd64.
- Preparing to unpack .../095-libcups2t64_2.4.10-3+deb13u1_amd64.deb ...
- Unpacking libcups2t64:amd64 (2.4.10-3+deb13u1) ...
- Selecting previously unselected package libepoxy0:amd64.
- Preparing to unpack .../096-libepoxy0_1.5.10-2_amd64.deb ...
- Unpacking libepoxy0:amd64 (1.5.10-2) ...
- Selecting previously unselected package libwayland-client0:amd64.
- Preparing to unpack .../097-libwayland-client0_1.23.1-3_amd64.deb ...
- Unpacking libwayland-client0:amd64 (1.23.1-3) ...
- Selecting previously unselected package libwayland-cursor0:amd64.
- Preparing to unpack .../098-libwayland-cursor0_1.23.1-3_amd64.deb ...
- Unpacking libwayland-cursor0:amd64 (1.23.1-3) ...
- Selecting previously unselected package libwayland-egl1:amd64.
- Preparing to unpack .../099-libwayland-egl1_1.23.1-3_amd64.deb ...
- Unpacking libwayland-egl1:amd64 (1.23.1-3) ...
- Selecting previously unselected package libxcomposite1:amd64.
- Preparing to unpack .../100-libxcomposite1_1%3a0.4.6-1_amd64.deb ...
- Unpacking libxcomposite1:amd64 (1:0.4.6-1) ...
- Selecting previously unselected package libxfixes3:amd64.
- Preparing to unpack .../101-libxfixes3_1%3a6.0.0-2+b4_amd64.deb ...
- Unpacking libxfixes3:amd64 (1:6.0.0-2+b4) ...
- Selecting previously unselected package libxcursor1:amd64.
- Preparing to unpack .../102-libxcursor1_1%3a1.2.3-1_amd64.deb ...
- Unpacking libxcursor1:amd64 (1:1.2.3-1) ...
- Selecting previously unselected package libxdamage1:amd64.
- Preparing to unpack .../103-libxdamage1_1%3a1.1.6-1+b2_amd64.deb ...
- Unpacking libxdamage1:amd64 (1:1.1.6-1+b2) ...
- Selecting previously unselected package libxinerama1:amd64.
- Preparing to unpack .../104-libxinerama1_2%3a1.1.4-3+b4_amd64.deb ...
- Unpacking libxinerama1:amd64 (2:1.1.4-3+b4) ...
- Selecting previously unselected package xkb-data.
- Preparing to unpack .../105-xkb-data_2.42-1_all.deb ...
- Unpacking xkb-data (2.42-1) ...
- Selecting previously unselected package libxkbcommon0:amd64.
- Preparing to unpack .../106-libxkbcommon0_1.7.0-2_amd64.deb ...
- Unpacking libxkbcommon0:amd64 (1.7.0-2) ...
- Selecting previously unselected package libxrandr2:amd64.
- Preparing to unpack .../107-libxrandr2_2%3a1.5.4-1+b3_amd64.deb ...
- Unpacking libxrandr2:amd64 (2:1.5.4-1+b3) ...
- Selecting previously unselected package libgtk-3-common.
- Preparing to unpack .../108-libgtk-3-common_3.24.49-3_all.deb ...
- Unpacking libgtk-3-common (3.24.49-3) ...
- Selecting previously unselected package libgtk-3-0t64:amd64.
- Preparing to unpack .../109-libgtk-3-0t64_3.24.49-3_amd64.deb ...
- Unpacking libgtk-3-0t64:amd64 (3.24.49-3) ...
- Selecting previously unselected package libnotify4:amd64.
- Preparing to unpack .../110-libnotify4_0.8.6-1_amd64.deb ...
- Unpacking libnotify4:amd64 (0.8.6-1) ...
- Selecting previously unselected package libice6:amd64.
- Preparing to unpack .../111-libice6_2%3a1.1.1-1_amd64.deb ...
- Unpacking libice6:amd64 (2:1.1.1-1) ...
- Selecting previously unselected package libsm6:amd64.
- Preparing to unpack .../112-libsm6_2%3a1.2.6-1_amd64.deb ...
- Unpacking libsm6:amd64 (2:1.2.6-1) ...
- Selecting previously unselected package libwxgtk3.2-1t64:amd64.
- Preparing to unpack .../113-libwxgtk3.2-1t64_3.2.8+dfsg-2_amd64.deb ...
- Unpacking libwxgtk3.2-1t64:amd64 (3.2.8+dfsg-2) ...
- Selecting previously unselected package gnuplot-x11.
- Preparing to unpack .../114-gnuplot-x11_6.0.2+dfsg1-1_amd64.deb ...
- Unpacking gnuplot-x11 (6.0.2+dfsg1-1) ...
- Selecting previously unselected package libann0.
- Preparing to unpack .../115-libann0_1.1.2+doc-9+b1_amd64.deb ...
- Unpacking libann0 (1.1.2+doc-9+b1) ...
- Selecting previously unselected package libcdt5:amd64.
- Preparing to unpack .../116-libcdt5_2.42.4-3_amd64.deb ...
- Unpacking libcdt5:amd64 (2.42.4-3) ...
- Selecting previously unselected package libcgraph6:amd64.
- Preparing to unpack .../117-libcgraph6_2.42.4-3_amd64.deb ...
- Unpacking libcgraph6:amd64 (2.42.4-3) ...
- Selecting previously unselected package libgts-0.7-5t64:amd64.
- Preparing to unpack .../118-libgts-0.7-5t64_0.7.6+darcs121130-5.2+b1_amd64.deb ...
- Unpacking libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2+b1) ...
- Selecting previously unselected package libltdl7:amd64.
- Preparing to unpack .../119-libltdl7_2.5.4-4_amd64.deb ...
- Unpacking libltdl7:amd64 (2.5.4-4) ...
- Selecting previously unselected package libpathplan4:amd64.
- Preparing to unpack .../120-libpathplan4_2.42.4-3_amd64.deb ...
- Unpacking libpathplan4:amd64 (2.42.4-3) ...
- Selecting previously unselected package libgvc6.
- Preparing to unpack .../121-libgvc6_2.42.4-3_amd64.deb ...
- Unpacking libgvc6 (2.42.4-3) ...
- Selecting previously unselected package libgvpr2:amd64.
- Preparing to unpack .../122-libgvpr2_2.42.4-3_amd64.deb ...
- Unpacking libgvpr2:amd64 (2.42.4-3) ...
- Selecting previously unselected package liblab-gamut1:amd64.
- Preparing to unpack .../123-liblab-gamut1_2.42.4-3_amd64.deb ...
- Unpacking liblab-gamut1:amd64 (2.42.4-3) ...
- Selecting previously unselected package libxt6t64:amd64.
- Preparing to unpack .../124-libxt6t64_1%3a1.2.1-1.2+b2_amd64.deb ...
- Unpacking libxt6t64:amd64 (1:1.2.1-1.2+b2) ...
- Selecting previously unselected package libxmu6:amd64.
- Preparing to unpack .../125-libxmu6_2%3a1.1.3-3+b4_amd64.deb ...
- Unpacking libxmu6:amd64 (2:1.1.3-3+b4) ...
- Selecting previously unselected package libxaw7:amd64.
- Preparing to unpack .../126-libxaw7_2%3a1.0.16-1_amd64.deb ...
- Unpacking libxaw7:amd64 (2:1.0.16-1) ...
- Selecting previously unselected package graphviz.
- Preparing to unpack .../127-graphviz_2.42.4-3_amd64.deb ...
- Unpacking graphviz (2.42.4-3) ...
- Selecting previously unselected package libboost-iostreams1.83.0:amd64.
- Preparing to unpack .../128-libboost-iostreams1.83.0_1.83.0-4.2_amd64.deb ...
- Unpacking libboost-iostreams1.83.0:amd64 (1.83.0-4.2) ...
- Selecting previously unselected package libboost-python1.83.0.
- Preparing to unpack .../129-libboost-python1.83.0_1.83.0-4.2_amd64.deb ...
- Unpacking libboost-python1.83.0 (1.83.0-4.2) ...
- Selecting previously unselected package libboost-numpy1.83.0.
- Preparing to unpack .../130-libboost-numpy1.83.0_1.83.0-4.2_amd64.deb ...
- Unpacking libboost-numpy1.83.0 (1.83.0-4.2) ...
- Selecting previously unselected package libboost-serialization1.83.0:amd64.
- Preparing to unpack .../131-libboost-serialization1.83.0_1.83.0-4.2_amd64.deb ...
- Unpacking libboost-serialization1.83.0:amd64 (1.83.0-4.2) ...
- Selecting previously unselected package libcoordgen3:amd64.
- Preparing to unpack .../132-libcoordgen3_3.0.2-1+b2_amd64.deb ...
- Unpacking libcoordgen3:amd64 (3.0.2-1+b2) ...
- Selecting previously unselected package libjson-c5:amd64.
- Preparing to unpack .../133-libjson-c5_0.18+ds-1_amd64.deb ...
- Unpacking libjson-c5:amd64 (0.18+ds-1) ...
- Selecting previously unselected package libcryptsetup12:amd64.
- Preparing to unpack .../134-libcryptsetup12_2%3a2.7.5-2_amd64.deb ...
- Unpacking libcryptsetup12:amd64 (2:2.7.5-2) ...
- Selecting previously unselected package libgdk-pixbuf2.0-bin.
- Preparing to unpack .../135-libgdk-pixbuf2.0-bin_2.42.12+dfsg-4_amd64.deb ...
- Unpacking libgdk-pixbuf2.0-bin (2.42.12+dfsg-4) ...
- Selecting previously unselected package libglib2.0-data.
- Preparing to unpack .../136-libglib2.0-data_2.84.4-3~deb13u1_all.deb ...
- Unpacking libglib2.0-data (2.84.4-3~deb13u1) ...
- Selecting previously unselected package libgtk-3-bin.
- Preparing to unpack .../137-libgtk-3-bin_3.24.49-3_amd64.deb ...
- Unpacking libgtk-3-bin (3.24.49-3) ...
- Selecting previously unselected package libgts-bin.
- Preparing to unpack .../138-libgts-bin_0.7.6+darcs121130-5.2+b1_amd64.deb ...
- Unpacking libgts-bin (0.7.6+darcs121130-5.2+b1) ...
- Selecting previously unselected package libheif-plugin-aomenc:amd64.
- Preparing to unpack .../139-libheif-plugin-aomenc_1.19.8-1_amd64.deb ...
- Unpacking libheif-plugin-aomenc:amd64 (1.19.8-1) ...
- Selecting previously unselected package libnuma1:amd64.
- Preparing to unpack .../140-libnuma1_2.0.19-1_amd64.deb ...
- Unpacking libnuma1:amd64 (2.0.19-1) ...
- Selecting previously unselected package libx265-215:amd64.
- Preparing to unpack .../141-libx265-215_4.1-2_amd64.deb ...
- Unpacking libx265-215:amd64 (4.1-2) ...
- Selecting previously unselected package libheif-plugin-x265:amd64.
- Preparing to unpack .../142-libheif-plugin-x265_1.19.8-1_amd64.deb ...
- Unpacking libheif-plugin-x265:amd64 (1.19.8-1) ...
- Selecting previously unselected package libinchi1.07.
- Preparing to unpack .../143-libinchi1.07_1.07.3+dfsg-1_amd64.deb ...
- Unpacking libinchi1.07 (1.07.3+dfsg-1) ...
- Selecting previously unselected package libkmod2:amd64.
- Preparing to unpack .../144-libkmod2_34.2-2_amd64.deb ...
- Unpacking libkmod2:amd64 (34.2-2) ...
- Selecting previously unselected package libmaeparser1:amd64.
- Preparing to unpack .../145-libmaeparser1_1.3.1-1+b2_amd64.deb ...
- Unpacking libmaeparser1:amd64 (1.3.1-1+b2) ...
- Selecting previously unselected package libnlopt0:amd64.
- Preparing to unpack .../146-libnlopt0_2.7.1-6+b4_amd64.deb ...
- Unpacking libnlopt0:amd64 (2.7.1-6+b4) ...
- Selecting previously unselected package libnlopt-dev:amd64.
- Preparing to unpack .../147-libnlopt-dev_2.7.1-6+b4_amd64.deb ...
- Unpacking libnlopt-dev:amd64 (2.7.1-6+b4) ...
- Selecting previously unselected package libpkgconf3:amd64.
- Preparing to unpack .../148-libpkgconf3_1.8.1-4_amd64.deb ...
- Unpacking libpkgconf3:amd64 (1.8.1-4) ...
- Selecting previously unselected package librdkit1t64.
- Preparing to unpack .../149-librdkit1t64_202503.1-4_amd64.deb ...
- Unpacking librdkit1t64 (202503.1-4) ...
- Selecting previously unselected package librdkit-dev.
- Preparing to unpack .../150-librdkit-dev_202503.1-4_amd64.deb ...
- Unpacking librdkit-dev (202503.1-4) ...
- Selecting previously unselected package librsvg2-2:amd64.
- Preparing to unpack .../151-librsvg2-2_2.60.0+dfsg-1_amd64.deb ...
- Unpacking librsvg2-2:amd64 (2.60.0+dfsg-1) ...
- Selecting previously unselected package librsvg2-common:amd64.
- Preparing to unpack .../152-librsvg2-common_2.60.0+dfsg-1_amd64.deb ...
- Unpacking librsvg2-common:amd64 (2.60.0+dfsg-1) ...
- Selecting previously unselected package pkgconf-bin.
- Preparing to unpack .../153-pkgconf-bin_1.8.1-4_amd64.deb ...
- Unpacking pkgconf-bin (1.8.1-4) ...
- Selecting previously unselected package pkgconf:amd64.
- Preparing to unpack .../154-pkgconf_1.8.1-4_amd64.deb ...
- Unpacking pkgconf:amd64 (1.8.1-4) ...
- Selecting previously unselected package pkg-config:amd64.
- Preparing to unpack .../155-pkg-config_1.8.1-4_amd64.deb ...
- Unpacking pkg-config:amd64 (1.8.1-4) ...
- Selecting previously unselected package rdkit-data.
- Preparing to unpack .../156-rdkit-data_202503.1-4_all.deb ...
- Unpacking rdkit-data (202503.1-4) ...
- Selecting previously unselected package python3-rdkit.
- Preparing to unpack .../157-python3-rdkit_202503.1-4_amd64.deb ...
- Unpacking python3-rdkit (202503.1-4) ...
- Selecting previously unselected package systemd-cryptsetup.
- Preparing to unpack .../158-systemd-cryptsetup_257.8-1~deb13u2_amd64.deb ...
- Unpacking systemd-cryptsetup (257.8-1~deb13u2) ...
- Selecting previously unselected package xdg-user-dirs.
- Preparing to unpack .../159-xdg-user-dirs_0.18-2_amd64.deb ...
- Unpacking xdg-user-dirs (0.18-2) ...
- Setting up media-types (13.0.0) ...
- Setting up libgraphite2-3:amd64 (1.3.14-2+b1) ...
- Setting up libboost-python1.83.0 (1.83.0-4.2) ...
- Setting up liblcms2-2:amd64 (2.16-2) ...
- Setting up libpixman-1-0:amd64 (0.44.0-3) ...
- Setting up libsharpyuv0:amd64 (1.5.0-0.1) ...
- Setting up libaom3:amd64 (3.12.1-1) ...
- Setting up systemd-sysv (257.8-1~deb13u2) ...
- Setting up libxdamage1:amd64 (1:1.1.6-1+b2) ...
- Setting up liblerc4:amd64 (4.0.0+ds-5) ...
- Setting up libxpm4:amd64 (1:3.5.17-1+b3) ...
- Setting up hicolor-icon-theme (0.18-2) ...
- Setting up libxi6:amd64 (2:1.8.2-1) ...
- Setting up libxrender1:amd64 (1:0.9.12-1) ...
- Setting up libdatrie1:amd64 (0.2.13-3+b1) ...
- Setting up xdg-user-dirs (0.18-2) ...
- Setting up libxcb-render0:amd64 (1.17.0-2+b1) ...
- Setting up liblab-gamut1:amd64 (2.42.4-3) ...
- Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-4) ...
- Setting up x11-common (1:7.7+24) ...
- invoke-rc.d: could not determine current runlevel
- invoke-rc.d: policy-rc.d denied execution of start.
- Setting up libdeflate0:amd64 (1.23-2) ...
- Setting up fonts-freefont-ttf (20211204+svn4273-2) ...
- Setting up m4 (1.4.19-8) ...
- Setting up libnss-systemd:amd64 (257.8-1~deb13u2) ...
- Setting up xkb-data (2.42-1) ...
- Setting up libnlopt0:amd64 (2.7.1-6+b4) ...
- Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ...
- Setting up rdkit-data (202503.1-4) ...
- Setting up libabsl20240722:amd64 (20240722.0-4) ...
- Setting up libjbig0:amd64 (2.1-6.1+b2) ...
- Setting up libboost-serialization1.83.0:amd64 (1.83.0-4.2) ...
- Setting up libboost-numpy1.83.0 (1.83.0-4.2) ...
- Setting up autotools-dev (20240727.1) ...
- Setting up libpcre2-32-0:amd64 (10.46-1~deb13u1) ...
- Setting up libglib2.0-0t64:amd64 (2.84.4-3~deb13u1) ...
- Setting up libblas3:amd64 (3.12.1-6) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
- Setting up libglib2.0-data (2.84.4-3~deb13u1) ...
- Setting up libpkgconf3:amd64 (1.8.1-4) ...
- Setting up libjpeg62-turbo:amd64 (1:2.1.5-4) ...
- Setting up libsvtav1enc2:amd64 (2.3.0+dfsg-1) ...
- Setting up libepoxy0:amd64 (1.5.10-2) ...
- Setting up libxfixes3:amd64 (1:6.0.0-2+b4) ...
- Setting up libboost-iostreams1.83.0:amd64 (1.83.0-4.2) ...
- Setting up libpathplan4:amd64 (2.42.4-3) ...
- Setting up aglfn (1.7+git20191031.4036a9c-2) ...
- Setting up libavahi-common-data:amd64 (0.8-16) ...
- Setting up libann0 (1.1.2+doc-9+b1) ...
- Setting up libdbus-1-3:amd64 (1.16.2-2) ...
- Setting up libfribidi0:amd64 (1.0.16-1) ...
- Setting up libxinerama1:amd64 (2:1.1.4-3+b4) ...
- Setting up libimagequant0:amd64 (2.18.0-1+b2) ...
- Setting up fonts-dejavu-mono (2.37-8) ...
- Setting up libpng16-16t64:amd64 (1.6.48-1) ...
- Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1) ...
- Setting up systemd-timesyncd (257.8-1~deb13u2) ...
- Creating group 'systemd-timesync' with GID 997.
- Creating user 'systemd-timesync' (systemd Time Synchronization) with UID 997 and GID 997.
- Created symlink '/etc/systemd/system/dbus-org.freedesktop.timesync1.service' → '/usr/lib/systemd/system/systemd-timesyncd.service'.
- Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-timesyncd.service' → '/usr/lib/systemd/system/systemd-timesyncd.service'.
- Setting up libxrandr2:amd64 (2:1.5.4-1+b3) ...
- Setting up fonts-dejavu-core (2.37-8) ...
- Setting up libgav1-1:amd64 (0.19.0-3+b1) ...
- Setting up pkgconf-bin (1.8.1-4) ...
- Setting up libltdl7:amd64 (2.5.4-4) ...
- Setting up libgfortran5:amd64 (14.2.0-19) ...
- Setting up autoconf (2.72-3.1) ...
- Setting up libwebp7:amd64 (1.5.0-0.1) ...
- Setting up libnuma1:amd64 (2.0.19-1) ...
- Setting up libdav1d7:amd64 (1.5.1-1) ...
- Setting up at-spi2-common (2.56.2-1) ...
- Setting up libtiff6:amd64 (4.7.0-3) ...
- Setting up dbus-session-bus-common (1.16.2-2) ...
- Setting up librav1e0.7:amd64 (0.7.1-9+b2) ...
- Setting up fonts-liberation (1:2.1.5-3) ...
- Setting up liblua5.4-0:amd64 (5.4.7-1+b2) ...
- Setting up libthai-data (0.1.29-2) ...
- Setting up libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2+b1) ...
- Setting up libcdt5:amd64 (2.42.4-3) ...
- Setting up libcgraph6:amd64 (2.42.4-3) ...
- Setting up libwayland-egl1:amd64 (1.23.1-3) ...
- Setting up libcoordgen3:amd64 (3.0.2-1+b2) ...
- Setting up libwxbase3.2-1t64:amd64 (3.2.8+dfsg-2) ...
- Setting up fonts-liberation-sans-narrow (1:1.07.6-4) ...
- Setting up dbus-system-bus-common (1.16.2-2) ...
- Creating group 'messagebus' with GID 996.
- Creating user 'messagebus' (System Message Bus) with UID 996 and GID 996.
- Setting up libnlopt-dev:amd64 (2.7.1-6+b4) ...
- Setting up libde265-0:amd64 (1.0.15-1+b3) ...
- Setting up libx265-215:amd64 (4.1-2) ...
- Setting up libwebpmux3:amd64 (1.5.0-0.1) ...
- Setting up libinchi1.07 (1.07.3+dfsg-1) ...
- Setting up libyuv0:amd64 (0.0.1904.20250204-1) ...
- Setting up libxcomposite1:amd64 (1:0.4.6-1) ...
- Setting up libjson-c5:amd64 (0.18+ds-1) ...
- Setting up readline-common (8.2-6) ...
- Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-2.1+deb13u1) ...
- Setting up dbus-bin (1.16.2-2) ...
- Setting up libkmod2:amd64 (34.2-2) ...
- Setting up libxkbcommon0:amd64 (1.7.0-2) ...
- Setting up libwayland-client0:amd64 (1.23.1-3) ...
- Setting up automake (1:1.17-4) ...
- update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode
- Setting up gnuplot-data (6.0.2+dfsg1-1) ...
- Setting up libgts-bin (0.7.6+darcs121130-5.2+b1) ...
- Setting up libice6:amd64 (2:1.1.1-1) ...
- Setting up libavif16:amd64 (1.2.1-1.2) ...
- Setting up liblapack3:amd64 (3.12.1-6) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- Setting up libatk1.0-0t64:amd64 (2.56.2-1) ...
- Setting up fontconfig-config (2.15.0-2.3) ...
- Setting up libxtst6:amd64 (2:1.2.5-1) ...
- Setting up libxcursor1:amd64 (1:1.2.3-1) ...
- Setting up libavahi-common3:amd64 (0.8-16) ...
- Setting up libcloudproviders0:amd64 (0.3.6-2) ...
- Setting up dbus-daemon (1.16.2-2) ...
- Setting up libcolord2:amd64 (1.4.7-3) ...
- Setting up pkgconf:amd64 (1.8.1-4) ...
- Setting up libmaeparser1:amd64 (1.3.1-1+b2) ...
- Setting up libdconf1:amd64 (0.40.0-5) ...
- Setting up libthai0:amd64 (0.1.29-2+b1) ...
- Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ...
- Setting up libatspi2.0-0t64:amd64 (2.56.2-1) ...
- Setting up dbus (1.16.2-2) ...
- invoke-rc.d: could not determine current runlevel
- invoke-rc.d: policy-rc.d denied execution of start.
- Setting up shared-mime-info (2.4-5+b2) ...
- Setting up pkg-config:amd64 (1.8.1-4) ...
- Setting up libreadline8t64:amd64 (8.2-6) ...
- Setting up libgvpr2:amd64 (2.42.4-3) ...
- Setting up libwayland-cursor0:amd64 (1.23.1-3) ...
- Setting up libpam-systemd:amd64 (257.8-1~deb13u2) ...
- Setting up libharfbuzz0b:amd64 (10.2.0-1+b1) ...
- Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-4) ...
- Setting up libfontconfig1:amd64 (2.15.0-2.3) ...
- Setting up libsm6:amd64 (2:1.2.6-1) ...
- Setting up libpython3.13-stdlib:amd64 (3.13.5-2) ...
- Setting up libavahi-client3:amd64 (0.8-16) ...
- Setting up libpython3-stdlib:amd64 (3.13.5-1) ...
- Setting up libatk-bridge2.0-0t64:amd64 (2.56.2-1) ...
- Setting up gtk-update-icon-cache (4.18.6+ds-2) ...
- Setting up fontconfig (2.15.0-2.3) ...
- Regenerating fonts cache...
- done.
- Setting up python3.13 (3.13.5-2) ...
- Setting up libpango-1.0-0:amd64 (1.56.3-1) ...
- Setting up python3 (3.13.5-1) ...
- running python rtupdate hooks for python3.13...
- running python post-rtupdate hooks for python3.13...
- Setting up libcairo2:amd64 (1.18.4-1+b1) ...
- Setting up dbus-user-session (1.16.2-2) ...
- Setting up adwaita-icon-theme (48.1-1) ...
- update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
- Setting up libnotify4:amd64 (0.8.6-1) ...
- Setting up libxt6t64:amd64 (1:1.2.1-1.2+b2) ...
- Setting up python3-numpy (1:2.2.4+ds-1) ...
- Setting up libgdk-pixbuf2.0-bin (2.42.12+dfsg-4) ...
- Setting up libcairo-gobject2:amd64 (1.18.4-1+b1) ...
- Setting up libpangoft2-1.0-0:amd64 (1.56.3-1) ...
- Setting up libcups2t64:amd64 (2.4.10-3+deb13u1) ...
- Setting up libpangocairo-1.0-0:amd64 (1.56.3-1) ...
- Setting up libxmu6:amd64 (2:1.1.3-3+b4) ...
- Setting up librdkit1t64 (202503.1-4) ...
- Setting up dconf-service (0.40.0-5) ...
- Setting up libxaw7:amd64 (2:1.0.16-1) ...
- Setting up librsvg2-2:amd64 (2.60.0+dfsg-1) ...
- Setting up python3-rdkit (202503.1-4) ...
- Setting up librdkit-dev (202503.1-4) ...
- Setting up librsvg2-common:amd64 (2.60.0+dfsg-1) ...
- Setting up dconf-gsettings-backend:amd64 (0.40.0-5) ...
- Setting up libgtk-3-common (3.24.49-3) ...
- Setting up gsettings-desktop-schemas (48.0-1) ...
- Setting up libgtk-3-0t64:amd64 (3.24.49-3) ...
- Setting up at-spi2-core (2.56.2-1) ...
- Setting up libwxgtk3.2-1t64:amd64 (3.2.8+dfsg-2) ...
- Setting up libgtk-3-bin (3.24.49-3) ...
- Setting up dmsetup (2:1.02.205-2) ...
- Setting up libheif-plugin-dav1d:amd64 (1.19.8-1) ...
- Setting up libheif-plugin-libde265:amd64 (1.19.8-1) ...
- Setting up libheif1:amd64 (1.19.8-1) ...
- Setting up libgd3:amd64 (2.3.3-13) ...
- Setting up libgvc6 (2.42.4-3) ...
- Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2) ...
- Setting up libcryptsetup12:amd64 (2:2.7.5-2) ...
- Setting up gnuplot-x11 (6.0.2+dfsg1-1) ...
- update-alternatives: using /usr/bin/gnuplot-x11 to provide /usr/bin/gnuplot (gnuplot) in auto mode
- Setting up graphviz (2.42.4-3) ...
- Setting up libheif-plugin-x265:amd64 (1.19.8-1) ...
- Setting up libheif-plugin-aomenc:amd64 (1.19.8-1) ...
- Setting up systemd-cryptsetup (257.8-1~deb13u2) ...
- Processing triggers for procps (2:4.0.4-9) ...
- grep: /proc/1/environ: Permission denied
- procps: Applying updated sysctl configuration
- sysctl: permission denied on key "kernel.core_pattern"
- sysctl: permission denied on key "kernel.unprivileged_userns_clone"
- sysctl: permission denied on key "kernel.sysrq"
- sysctl: permission denied on key "kernel.core_uses_pid"
- sysctl: permission denied on key "net.ipv4.conf.default.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.docker0.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.eno1.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.eno2.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.eno3.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.eno4.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.enp130s0f0.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.enp130s0f1.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.lo.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.veth2501096.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.vethf4c2dac.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.default.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.docker0.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.eno1.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.eno2.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.eno3.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.eno4.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.enp130s0f0.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.enp130s0f1.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.lo.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.veth2501096.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.vethf4c2dac.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.default.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.docker0.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.eno1.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.eno2.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.eno3.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.eno4.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.enp130s0f0.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.enp130s0f1.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.lo.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.veth2501096.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.vethf4c2dac.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.ping_group_range", ignoring
- sysctl: permission denied on key "net.core.default_qdisc", ignoring
- sysctl: permission denied on key "fs.protected_hardlinks"
- sysctl: permission denied on key "fs.protected_symlinks"
- sysctl: permission denied on key "fs.protected_regular"
- sysctl: permission denied on key "fs.protected_fifos"
- sysctl: permission denied on key "vm.max_map_count"
- sysctl: permission denied on key "kernel.pid_max"
- Processing triggers for libc-bin (2.41-12) ...
- Processing triggers for systemd (257.8-1~deb13u2) ...
- Processing triggers for libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-4) ...
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved batteries.3.9.0 (cached)
-> retrieved bst.7.1.0 (cached)
-> retrieved camlp-streams.5.0.1 (cached)
-> retrieved conf-python-3.9.0.0 (cached)
-> retrieved conf-rdkit.1 (cached)
-> retrieved cpm.12.2.0 (cached)
-> retrieved cpu.2.0.0 (cached)
-> retrieved dolog.6.0.0 (cached)
-> retrieved line_oriented.1.3.0 (cached)
-> retrieved minicli.5.0.2 (cached)
-> installed conf-graphviz.0.1
-> installed conf-pkg-config.4
-> retrieved molenc.16.13.0 (cached)
-> installed conf-python-3.9.0.0
-> retrieved nlopt.0.7.0 (cached)
-> installed conf-gnuplot.0.1
-> installed conf-autoconf.0.2
-> installed conf-nlopt.1
-> retrieved num.1.6 (cached)
-> installed conf-rdkit.1
-> installed minicli.5.0.2
-> installed dolog.6.0.0
-> retrieved ocamlgraph.2.2.0 (cached)
-> retrieved parany.12.2.2 (cached)
-> retrieved pyml.20250807 (cached)
-> retrieved rankers.2.0.7 (cached)
-> installed camlp-streams.5.0.1
-> retrieved stdcompat.21.1 (cached)
-> installed nlopt.0.7.0
-> installed nlopt-ocaml.transition
-> retrieved vector3.1.0.0 (cached)
-> installed vector3.1.0.0
-> installed num.1.6
-> installed cpu.2.0.0
-> installed ocamlgraph.2.2.0
-> installed stdcompat.21.1
-> installed parany.12.2.2
-> installed batteries.3.9.0
-> installed pyml.20250807
-> installed line_oriented.1.3.0
-> installed bst.7.1.0
-> installed cpm.12.2.0
-> installed molenc.16.13.0
-> installed rankers.2.0.7
Done.
<><> nlopt-ocaml.transition installed successfully ><><><><><><><><><><><><><><>
=> NLopt-ocaml has been renamed and the nlopt-ocaml package is now a transition package. Use the nlopt package instead.
# To update the current shell environment, run: eval $(opam env)
2025-09-22 13:23.43 ---> saved as "9252db53b194ce55858871b6fd7691d054598f0d2acb25469eb5d53dfe56e63d"
/home/opam: (run (network host)
(shell "(opam reinstall --with-test rankers.2.0.7) || true"))
The following actions will be performed:
=== recompile 1 package
- recompile rankers 2.0.7
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved rankers.2.0.7 (https://opam.ocaml.org/cache)
-> removed rankers.2.0.7
-> installed rankers.2.0.7
Done.
# To update the current shell environment, run: eval $(opam env)
2025-09-22 13:23.50 ---> saved as "9e4b918b96ab080581e756c7ec45d3fe97f0c3455d5a159ec8a7f40d00511a89"
/home/opam: (run (shell "opam reinstall --with-test --verbose rankers.2.0.7;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'rankers.2.0.7' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
The following actions will be performed:
=== recompile 1 package
- recompile rankers 2.0.7
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing 1/4: [rankers.2.0.7: extract]
-> retrieved rankers.2.0.7 (cached)
Processing 2/4: [rankers: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "rankers" "-j" "71" (CWD=/home/opam/.opam/4.14/.opam-switch/build/rankers.2.0.7)
-> compiled rankers.2.0.7
-> removed rankers.2.0.7
-> installed rankers.2.0.7
Done.
# To update the current shell environment, run: eval $(opam env)
2025-09-22 13:23.59 ---> saved as "d6d802775aa067c9fa8763456add780d2d552831009618954dc587a9f25ca870"
Job succeeded
2025-09-22 13:24.08: Job succeeded