- github
- ocaml
- opam-repository
- 7d6af5
- compilers,4.14,dune.3.21.0~alpha4,revdeps,svmwrap.4.0.0
(not at the head of any monitored branch or PR)
2025-12-15 03:24.21: New job: test svmwrap.4.0.0 with dune.3.21.0~alpha4, using opam dev
from https://github.com/ocaml/opam-repository.git#refs/pull/29096/head (7d6af52f05e2c06c00193b2918193b6994ece701)
on debian-13-ocaml-4.14/amd64
To reproduce locally:
cd $(mktemp -d)
git clone --recursive "https://github.com/ocaml/opam-repository.git" && cd "opam-repository" && git fetch origin "refs/pull/29096/head" && git reset --hard 7d6af52f
git fetch origin master
git merge --no-edit 2625e9877b44d517ad87b5bf4ff708f3e44b78d8
cat > ../Dockerfile <<'END-OF-DOCKERFILE'
FROM ocaml/opam:debian-13-ocaml-4.14@sha256:277168101f7d4ebc452a75f825628d280c76dd0be7d8bcb58c24a5e50fe3d10d
USER 1000:1000
WORKDIR /home/opam
RUN sudo ln -f /usr/bin/opam-dev /usr/bin/opam
RUN opam init --reinit -ni
RUN opam option solver=builtin-0install && opam config report
ENV OPAMDOWNLOADJOBS="1"
ENV OPAMERRLOGLEN="0"
ENV OPAMPRECISETRACKING="1"
ENV CI="true"
ENV OPAM_REPO_CI="true"
RUN rm -rf opam-repository/
COPY --chown=1000:1000 . opam-repository/
RUN opam repository set-url --strict default opam-repository/
RUN opam update --depexts || true
RUN opam pin add -k version -yn dune.3.21.0~alpha4 3.21.0~alpha4
RUN opam reinstall dune.3.21.0~alpha4; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-13\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'dune.3.21.0~alpha4' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
RUN opam reinstall svmwrap.4.0.0; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-13\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'svmwrap.4.0.0' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
RUN (opam reinstall --with-test svmwrap.4.0.0) || true
RUN opam reinstall --with-test --verbose svmwrap.4.0.0; \
res=$?; \
test "$res" != 31 && exit "$res"; \
export OPAMCLI=2.0; \
build_dir=$(opam var prefix)/.opam-switch/build; \
failed=$(ls "$build_dir"); \
partial_fails=""; \
for pkg in $failed; do \
if opam show -f x-ci-accept-failures: "$pkg" | grep -qF "\"debian-13\""; then \
echo "A package failed and has been disabled for CI using the 'x-ci-accept-failures' field."; \
fi; \
test "$pkg" != 'svmwrap.4.0.0' && partial_fails="$partial_fails $pkg"; \
done; \
test "${partial_fails}" != "" && echo "opam-repo-ci detected dependencies failing: ${partial_fails}"; \
exit 1
END-OF-DOCKERFILE
docker build -f ../Dockerfile .
2025-12-15 03:24.21: Using cache hint "ocaml/opam:debian-13-ocaml-4.14@sha256:277168101f7d4ebc452a75f825628d280c76dd0be7d8bcb58c24a5e50fe3d10d-dune.3.21.0~alpha4-svmwrap.4.0.0-7d6af52f05e2c06c00193b2918193b6994ece701"
2025-12-15 03:24.21: Using OBuilder spec:
((from ocaml/opam:debian-13-ocaml-4.14@sha256:277168101f7d4ebc452a75f825628d280c76dd0be7d8bcb58c24a5e50fe3d10d)
(user (uid 1000) (gid 1000))
(workdir /home/opam)
(run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
(run (network host)
(shell "opam init --reinit --config .opamrc-sandbox -ni"))
(run (shell "opam option solver=builtin-0install && opam config report"))
(env OPAMDOWNLOADJOBS 1)
(env OPAMERRLOGLEN 0)
(env OPAMPRECISETRACKING 1)
(env CI true)
(env OPAM_REPO_CI true)
(run (shell "rm -rf opam-repository/"))
(copy (src .) (dst opam-repository/))
(run (shell "opam repository set-url --strict default opam-repository/"))
(run (network host)
(shell "opam update --depexts || true"))
(run (shell "opam pin add -k version -yn dune.3.21.0~alpha4 3.21.0~alpha4"))
(run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall dune.3.21.0~alpha4;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'dune.3.21.0~alpha4' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
(run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall svmwrap.4.0.0;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'svmwrap.4.0.0' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
(run (network host)
(shell "(opam reinstall --with-test svmwrap.4.0.0) || true"))
(run (shell "opam reinstall --with-test --verbose svmwrap.4.0.0;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'svmwrap.4.0.0' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
)
2025-12-15 03:24.21: Waiting for resource in pool OCluster
2025-12-15 15:18.41: Waiting for worker…
2025-12-15 15:31.56: Got resource from pool OCluster
Building on odawa.caelum.ci.dev
All commits already cached
HEAD is now at 2625e9877b Merge pull request #29094 from anmonteiro/patch-9
Updating 2625e9877b..7d6af52f05
Fast-forward
.../chrome-trace/chrome-trace.3.21.0~alpha4/opam | 41 ++++++++++++
.../dune-action-plugin.3.21.0~alpha4/opam | 54 ++++++++++++++++
.../dune-build-info.3.21.0~alpha4/opam | 47 ++++++++++++++
.../dune-configurator.3.21.0~alpha4/opam | 51 +++++++++++++++
packages/dune-glob/dune-glob.3.21.0~alpha4/opam | 44 +++++++++++++
.../dune-private-libs.3.21.0~alpha4/opam | 52 +++++++++++++++
.../dune-rpc-lwt/dune-rpc-lwt.3.21.0~alpha4/opam | 43 +++++++++++++
packages/dune-rpc/dune-rpc.3.21.0~alpha4/opam | 46 +++++++++++++
packages/dune-site/dune-site.3.21.0~alpha4/opam | 39 +++++++++++
packages/dune/dune.3.21.0~alpha4/opam | 75 ++++++++++++++++++++++
packages/dyn/dyn.3.21.0~alpha4/opam | 42 ++++++++++++
packages/fs-io/fs-io.3.21.0~alpha4/opam | 41 ++++++++++++
packages/ocamlc-loc/ocamlc-loc.3.21.0~alpha4/opam | 45 +++++++++++++
packages/ordering/ordering.3.21.0~alpha4/opam | 40 ++++++++++++
packages/stdune/stdune.3.21.0~alpha4/opam | 48 ++++++++++++++
.../top-closure/top-closure.3.21.0~alpha4/opam | 40 ++++++++++++
packages/xdg/xdg.3.21.0~alpha4/opam | 41 ++++++++++++
17 files changed, 789 insertions(+)
create mode 100644 packages/chrome-trace/chrome-trace.3.21.0~alpha4/opam
create mode 100644 packages/dune-action-plugin/dune-action-plugin.3.21.0~alpha4/opam
create mode 100644 packages/dune-build-info/dune-build-info.3.21.0~alpha4/opam
create mode 100644 packages/dune-configurator/dune-configurator.3.21.0~alpha4/opam
create mode 100644 packages/dune-glob/dune-glob.3.21.0~alpha4/opam
create mode 100644 packages/dune-private-libs/dune-private-libs.3.21.0~alpha4/opam
create mode 100644 packages/dune-rpc-lwt/dune-rpc-lwt.3.21.0~alpha4/opam
create mode 100644 packages/dune-rpc/dune-rpc.3.21.0~alpha4/opam
create mode 100644 packages/dune-site/dune-site.3.21.0~alpha4/opam
create mode 100644 packages/dune/dune.3.21.0~alpha4/opam
create mode 100644 packages/dyn/dyn.3.21.0~alpha4/opam
create mode 100644 packages/fs-io/fs-io.3.21.0~alpha4/opam
create mode 100644 packages/ocamlc-loc/ocamlc-loc.3.21.0~alpha4/opam
create mode 100644 packages/ordering/ordering.3.21.0~alpha4/opam
create mode 100644 packages/stdune/stdune.3.21.0~alpha4/opam
create mode 100644 packages/top-closure/top-closure.3.21.0~alpha4/opam
create mode 100644 packages/xdg/xdg.3.21.0~alpha4/opam
(from ocaml/opam:debian-13-ocaml-4.14@sha256:277168101f7d4ebc452a75f825628d280c76dd0be7d8bcb58c24a5e50fe3d10d)
2025-12-15 15:32.03 ---> using "d81b3b20b9dbe813f4813251eb45f7f230344599357169e34b0d2f872bf65895" from cache
/: (user (uid 1000) (gid 1000))
/: (workdir /home/opam)
/home/opam: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
2025-12-15 15:32.03 ---> using "4c0c738834a7be54719ab9b07c911eba51e45ad4298c42597f7d3da72b1c15d4" from cache
/home/opam: (run (network host)
(shell "opam init --reinit --config .opamrc-sandbox -ni"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
This version of opam requires an update to the layout of /home/opam/.opam from version 2.0 to version 2.2, which can't be reverted.
You may want to back it up before going further.
Continue? [Y/n] y
[NOTE] The 'jobs' option was reset, its value was 71 and its new value will vary according to the current number of cores on your machine. You can restore the fixed value using:
opam option jobs=71 --global
Format upgrade done.
<><> Updating repositories ><><><><><><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
2025-12-15 15:32.03 ---> using "8bb6d27bb5f7ebe9771219e3ecd730184d5e10ab877134c11c12ee3b1a6d3b96" from cache
/home/opam: (run (shell "opam option solver=builtin-0install && opam config report"))
Set to 'builtin-0install' the field solver in global configuration
# opam config report
# opam-version 2.5.0
# self-upgrade no
# system arch=x86_64 os=linux os-distribution=debian os-version=13
# solver builtin-0install
# install-criteria -changed,-count[avoid-version,solution]
# upgrade-criteria -count[avoid-version,solution]
# jobs 255
# repositories 1 (version-controlled)
# pinned 1 (version)
# current-switch 4.14
# invariant ["ocaml-base-compiler" {= "4.14.2"}]
# compiler-packages ocaml-base-compiler.4.14.2, ocaml-options-vanilla.1
# ocaml:native true
# ocaml:native-tools true
# ocaml:native-dynlink true
# ocaml:stubsdir /home/opam/.opam/4.14/lib/ocaml/stublibs:/home/opam/.opam/4.14/lib/ocaml
# ocaml:preinstalled false
# ocaml:compiler 4.14.2
2025-12-15 15:32.03 ---> using "35019bd57e8933485bd938828fe288c3674216a4757e13b1dac8ce6b21035ac2" from cache
/home/opam: (env OPAMDOWNLOADJOBS 1)
/home/opam: (env OPAMERRLOGLEN 0)
/home/opam: (env OPAMPRECISETRACKING 1)
/home/opam: (env CI true)
/home/opam: (env OPAM_REPO_CI true)
/home/opam: (run (shell "rm -rf opam-repository/"))
2025-12-15 15:32.03 ---> using "e09ab9992a764acab15da9cff99e3d4d978b8a77f33714cc5d19d16d3539eb49" from cache
/home/opam: (copy (src .) (dst opam-repository/))
2025-12-15 15:32.03 ---> using "effd8012bb926235286407b71766f59239cdbd05eeb488dee8fd8b0266ec56c0" from cache
/home/opam: (run (shell "opam repository set-url --strict default opam-repository/"))
[default] Initialised
2025-12-15 15:32.03 ---> using "da8e6b523210d6314ae3052775034fea74104aae3f193362b9609201bf93d1d2" from cache
/home/opam: (run (network host)
(shell "opam update --depexts || true"))
+ /usr/bin/sudo "apt-get" "update"
- Hit:1 http://deb.debian.org/debian trixie InRelease
- Get:2 http://deb.debian.org/debian trixie-updates InRelease [47.3 kB]
- Get:3 http://deb.debian.org/debian-security trixie-security InRelease [43.4 kB]
- Get:4 http://deb.debian.org/debian-security trixie-security/main amd64 Packages [84.8 kB]
- Fetched 176 kB in 0s (2391 kB/s)
- Reading package lists...
2025-12-15 15:32.03 ---> using "cd39baac0c78bb4b886710bb093d6b750f25b1cabe39d7490bff23ee544310da" from cache
/home/opam: (run (shell "opam pin add -k version -yn dune.3.21.0~alpha4 3.21.0~alpha4"))
dune is now pinned to version 3.21.0~alpha4
2025-12-15 15:32.03 ---> using "8fd4998df15e439c69223004d2b17d12aff8d62773a9501108d16f563d9d556f" from cache
/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall dune.3.21.0~alpha4;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'dune.3.21.0~alpha4' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
dune.3.21.0~alpha4 is not installed. Install it? [Y/n] y
The following actions will be performed:
=== install 1 package
- install dune 3.21.0~alpha4 (pinned)
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved dune.3.21.0~alpha4 (cached)
-> installed dune.3.21.0~alpha4
Done.
# To update the current shell environment, run: eval $(opam env)
2025-12-15 15:32.03 ---> using "a0dac2d55bf4693943f9c996115066b2d719701eb6952f9fddf5ed215606993b" from cache
/home/opam: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam reinstall svmwrap.4.0.0;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'svmwrap.4.0.0' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
svmwrap.4.0.0 is not installed. Install it? [Y/n] y
The following actions will be performed:
=== install 45 packages
- install base-bytes base [required by dokeysto]
- install batteries 3.10.0 [required by svmwrap]
- install bst 7.1.0 [required by molenc]
- install camlp-streams 5.0.1 [required by batteries]
- install camltc 0.9.8 [required by dokeysto_camltc]
- install conf-autoconf 0.2 [required by cpu]
- install conf-bash 1 [required by camltc]
- install conf-graphviz 0.1 [required by molenc]
- install conf-libsvm-tools 1.0.0 [required by svmwrap]
- install conf-nlopt 1 [required by nlopt]
- install conf-pkg-config 4 [required by conf-nlopt]
- install conf-python-3 9.0.0 [required by molenc]
- install conf-rdkit 1 [required by molenc]
- install cpm 12.2.0 [required by svmwrap]
- install cppo 1.8.0 [required by lwt]
- install cpu 2.0.0 [required by parany]
- install csexp 1.5.2 [required by dune-configurator]
- install dokeysto 4.0.2 [required by dokeysto_camltc]
- install dokeysto_camltc 4.0.2 [required by molenc]
- install dolog 6.0.0 [required by svmwrap]
- install dune-configurator 3.21.0~alpha4 [required by extunix]
- install extunix 0.4.4 [required by dokeysto]
- install line_oriented 1.3.0 [required by svmwrap]
- install logs 0.10.0 [required by camltc]
- install lwt 5.9.2 [required by camltc]
- install minicli 5.0.2 [required by svmwrap]
- install molenc 16.13.0 [required by svmwrap]
- install nlopt 0.7.0 [required by nlopt-ocaml]
- install nlopt-ocaml transition [required by svmwrap]
- install num 1.6 [required by batteries]
- install ocaml-compiler-libs v0.12.4 [required by ppxlib]
- install ocamlbuild 0.16.1 [required by logs]
- install ocamlfind 1.9.8 [required by batteries]
- install ocamlgraph 2.2.0 [required by molenc]
- install ocplib-endian 1.2 [required by lwt]
- install parany 14.0.1 [required by svmwrap]
- install ppx_derivers 1.2.1 [required by ppxlib]
- install ppxlib 0.37.0 [required by extunix]
- install pyml 20250807 [required by molenc]
- install sexplib0 v0.17.0 [required by ppxlib]
- install stdcompat 21.1 [required by pyml]
- install stdlib-shims 0.3.0 [required by ppxlib]
- install svmwrap 4.0.0
- install topkg 1.1.1 [required by logs]
- install vector3 1.0.0 [required by molenc]
The following system packages will first need to be installed:
autoconf graphviz libnlopt-dev librdkit-dev libsvm-tools pkg-config python3 python3-rdkit
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run apt-get to install them (may need root/sudo access)
2. Display the recommended apt-get command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "autoconf" "graphviz" "libnlopt-dev" "librdkit-dev" "libsvm-tools" "pkg-config" "python3" "python3-rdkit"
- Preconfiguring packages ...
- Selecting previously unselected package libsystemd-shared:amd64.
- (Reading database ...
(Reading database ... 5%
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(Reading database ... 20622 files and directories currently installed.)
- Preparing to unpack .../libsystemd-shared_257.9-1~deb13u1_amd64.deb ...
- Unpacking libsystemd-shared:amd64 (257.9-1~deb13u1) ...
- Setting up libsystemd-shared:amd64 (257.9-1~deb13u1) ...
- Selecting previously unselected package systemd.
- (Reading database ...
(Reading database ... 5%
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(Reading database ... 20630 files and directories currently installed.)
- Preparing to unpack .../systemd_257.9-1~deb13u1_amd64.deb ...
- Unpacking systemd (257.9-1~deb13u1) ...
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- Setting up libpam-systemd:amd64 (257.9-1~deb13u1) ...
- Setting up libharfbuzz0b:amd64 (10.2.0-1+b1) ...
- Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-4) ...
- Setting up libfontconfig1:amd64 (2.15.0-2.3) ...
- Setting up libsm6:amd64 (2:1.2.6-1) ...
- Setting up libpython3.13-stdlib:amd64 (3.13.5-2) ...
- Setting up libavahi-client3:amd64 (0.8-16) ...
- Setting up libpython3-stdlib:amd64 (3.13.5-1) ...
- Setting up libdrm-amdgpu1:amd64 (2.4.124-2) ...
- Setting up libatk-bridge2.0-0t64:amd64 (2.56.2-1) ...
- Setting up libinput10:amd64 (1.28.1-1) ...
- Setting up mesa-vulkan-drivers:amd64 (25.0.7-2) ...
- Setting up gtk-update-icon-cache (4.18.6+ds-2) ...
- Setting up fontconfig (2.15.0-2.3) ...
- Regenerating fonts cache...
- done.
- Setting up python3.13 (3.13.5-2) ...
- Setting up libpango-1.0-0:amd64 (1.56.3-1) ...
- Setting up libdrm-intel1:amd64 (2.4.124-2) ...
- Setting up python3 (3.13.5-1) ...
- running python rtupdate hooks for python3.13...
- running python post-rtupdate hooks for python3.13...
- Setting up libcairo2:amd64 (1.18.4-1+b1) ...
- Setting up dbus-user-session (1.16.2-2) ...
- Setting up libqt5core5t64:amd64 (5.15.15+dfsg-6) ...
- Setting up adwaita-icon-theme (48.1-1) ...
- update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
- Setting up libnotify4:amd64 (0.8.6-1) ...
- Setting up libxt6t64:amd64 (1:1.2.1-1.2+b2) ...
- Setting up python3-numpy (1:2.2.4+ds-1) ...
- Setting up libgdk-pixbuf2.0-bin (2.42.12+dfsg-4) ...
- Setting up libcairo-gobject2:amd64 (1.18.4-1+b1) ...
- Setting up libpangoft2-1.0-0:amd64 (1.56.3-1) ...
- Setting up libcups2t64:amd64 (2.4.10-3+deb13u2) ...
- Setting up libpangocairo-1.0-0:amd64 (1.56.3-1) ...
- Setting up mesa-libgallium:amd64 (25.0.7-2) ...
- Setting up libxmu6:amd64 (2:1.1.3-3+b4) ...
- Setting up libqt5dbus5t64:amd64 (5.15.15+dfsg-6) ...
- Setting up librdkit1t64 (202503.1-4) ...
- Setting up libgbm1:amd64 (25.0.7-2) ...
- Setting up libgl1-mesa-dri:amd64 (25.0.7-2) ...
- Setting up libqt5network5t64:amd64 (5.15.15+dfsg-6) ...
- Setting up dconf-service (0.40.0-5) ...
- Setting up libxaw7:amd64 (2:1.0.16-1) ...
- Setting up librsvg2-2:amd64 (2.60.0+dfsg-1) ...
- Setting up libegl-mesa0:amd64 (25.0.7-2) ...
- Setting up libqt5qml5:amd64 (5.15.15+dfsg-3) ...
- Setting up python3-rdkit (202503.1-4) ...
- Setting up librdkit-dev (202503.1-4) ...
- Setting up librsvg2-common:amd64 (2.60.0+dfsg-1) ...
- Setting up libegl1:amd64 (1.7.0-1+b2) ...
- Setting up libqt5qmlmodels5:amd64 (5.15.15+dfsg-3) ...
- Setting up libglx-mesa0:amd64 (25.0.7-2) ...
- Setting up libglx0:amd64 (1.7.0-1+b2) ...
- Setting up dconf-gsettings-backend:amd64 (0.40.0-5) ...
- Setting up libgl1:amd64 (1.7.0-1+b2) ...
- Setting up libgtk-3-common (3.24.49-3) ...
- Setting up gsettings-desktop-schemas (48.0-1) ...
- Setting up libqt5gui5t64:amd64 (5.15.15+dfsg-6) ...
- Setting up libgtk-3-0t64:amd64 (3.24.49-3) ...
- Setting up at-spi2-core (2.56.2-1) ...
- Setting up libqt5quick5:amd64 (5.15.15+dfsg-3) ...
- Setting up libwxgtk3.2-1t64:amd64 (3.2.8+dfsg-2) ...
- Setting up libqt5widgets5t64:amd64 (5.15.15+dfsg-6) ...
- Setting up libqt5svg5:amd64 (5.15.15-2) ...
- Setting up libgtk-3-bin (3.24.49-3) ...
- Setting up qt5-gtk-platformtheme:amd64 (5.15.15+dfsg-6) ...
- Setting up libqt5waylandclient5:amd64 (5.15.15-3) ...
- Setting up libqt5waylandcompositor5:amd64 (5.15.15-3) ...
- Setting up libqt5printsupport5t64:amd64 (5.15.15+dfsg-6) ...
- Setting up qtwayland5:amd64 (5.15.15-3) ...
- Setting up dmsetup (2:1.02.205-2) ...
- Setting up libheif-plugin-dav1d:amd64 (1.19.8-1) ...
- Setting up libheif-plugin-libde265:amd64 (1.19.8-1) ...
- Setting up libheif1:amd64 (1.19.8-1) ...
- Setting up libgd3:amd64 (2.3.3-13) ...
- Setting up libgvc6 (2.42.4-3) ...
- Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2) ...
- Setting up libcryptsetup12:amd64 (2:2.7.5-2) ...
- Setting up graphviz (2.42.4-3) ...
- Setting up libheif-plugin-x265:amd64 (1.19.8-1) ...
- Setting up libheif-plugin-aomenc:amd64 (1.19.8-1) ...
- Setting up gnuplot-qt (6.0.2+dfsg1-1) ...
- update-alternatives: using /usr/bin/gnuplot-qt to provide /usr/bin/gnuplot (gnuplot) in auto mode
- Setting up libsvm-tools (3.24+ds-6.1) ...
- Setting up systemd-cryptsetup (257.9-1~deb13u1) ...
- Setting up gnuplot (6.0.2+dfsg1-1) ...
- Processing triggers for libc-bin (2.41-12) ...
- Processing triggers for systemd (257.9-1~deb13u1) ...
- Processing triggers for procps (2:4.0.4-9) ...
- grep: /proc/1/environ: Permission denied
- procps: Applying updated sysctl configuration
- sysctl: permission denied on key "kernel.core_pattern"
- sysctl: permission denied on key "kernel.unprivileged_userns_clone"
- sysctl: permission denied on key "kernel.sysrq"
- sysctl: permission denied on key "kernel.core_uses_pid"
- sysctl: permission denied on key "net.ipv4.conf.default.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.docker0.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.eno12399np0.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.eno12409np1.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.eno8303.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.eno8403.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.lo.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.veth2ddbba4.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.vethf78c42d.rp_filter"
- sysctl: permission denied on key "net.ipv4.conf.default.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.docker0.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.eno12399np0.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.eno12409np1.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.eno8303.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.eno8403.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.lo.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.veth2ddbba4.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.vethf78c42d.accept_source_route"
- sysctl: permission denied on key "net.ipv4.conf.default.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.docker0.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.eno12399np0.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.eno12409np1.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.eno8303.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.eno8403.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.lo.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.veth2ddbba4.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.conf.vethf78c42d.promote_secondaries"
- sysctl: permission denied on key "net.ipv4.ping_group_range", ignoring
- sysctl: permission denied on key "net.core.default_qdisc", ignoring
- sysctl: permission denied on key "fs.protected_hardlinks"
- sysctl: permission denied on key "fs.protected_symlinks"
- sysctl: permission denied on key "fs.protected_regular"
- sysctl: permission denied on key "fs.protected_fifos"
- sysctl: permission denied on key "vm.max_map_count"
- sysctl: permission denied on key "kernel.pid_max"
- Processing triggers for libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-4) ...
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved batteries.3.10.0 (cached)
-> retrieved bst.7.1.0 (cached)
-> retrieved camlp-streams.5.0.1 (cached)
-> retrieved camltc.0.9.8 (cached)
-> retrieved conf-python-3.9.0.0 (cached)
-> retrieved conf-rdkit.1 (cached)
-> retrieved cpm.12.2.0 (cached)
-> retrieved cppo.1.8.0 (cached)
-> installed conf-bash.1
-> retrieved cpu.2.0.0 (cached)
-> retrieved csexp.1.5.2 (cached)
-> retrieved dokeysto.4.0.2, dokeysto_camltc.4.0.2 (cached)
-> installed conf-autoconf.0.2
-> installed conf-graphviz.0.1
-> installed conf-pkg-config.4
-> installed conf-python-3.9.0.0
-> retrieved dolog.6.0.0 (cached)
-> installed conf-libsvm-tools.1.0.0
-> installed conf-nlopt.1
-> installed conf-rdkit.1
-> installed camlp-streams.5.0.1
-> installed csexp.1.5.2
-> installed dolog.6.0.0
-> retrieved dune-configurator.3.21.0~alpha4 (cached)
-> installed cppo.1.8.0
-> retrieved extunix.0.4.4 (cached)
-> retrieved line_oriented.1.3.0 (cached)
-> retrieved logs.0.10.0 (cached)
-> retrieved lwt.5.9.2 (cached)
-> retrieved minicli.5.0.2 (cached)
-> retrieved molenc.16.13.0 (cached)
-> retrieved nlopt.0.7.0 (cached)
-> retrieved num.1.6 (cached)
-> installed cpu.2.0.0
-> retrieved ocaml-compiler-libs.v0.12.4 (cached)
-> retrieved ocamlbuild.0.16.1 (cached)
-> installed minicli.5.0.2
-> retrieved ocamlfind.1.9.8 (cached)
-> retrieved ocamlgraph.2.2.0 (cached)
-> retrieved ocplib-endian.1.2 (cached)
-> retrieved parany.14.0.1 (cached)
-> retrieved ppx_derivers.1.2.1 (cached)
-> installed nlopt.0.7.0
-> installed nlopt-ocaml.transition
-> retrieved ppxlib.0.37.0 (cached)
-> retrieved pyml.20250807 (cached)
-> installed ppx_derivers.1.2.1
-> installed parany.14.0.1
-> retrieved sexplib0.v0.17.0 (cached)
-> retrieved stdcompat.21.1 (cached)
-> installed ocaml-compiler-libs.v0.12.4
-> installed sexplib0.v0.17.0
-> retrieved stdlib-shims.0.3.0 (cached)
-> retrieved svmwrap.4.0.0 (cached)
-> installed dune-configurator.3.21.0~alpha4
-> retrieved topkg.1.1.1 (cached)
-> retrieved vector3.1.0.0 (cached)
-> installed stdlib-shims.0.3.0
-> installed num.1.6
-> installed vector3.1.0.0
-> installed ocamlgraph.2.2.0
-> installed ocamlfind.1.9.8
-> installed base-bytes.base
-> installed stdcompat.21.1
-> installed ocplib-endian.1.2
-> installed ocamlbuild.0.16.1
-> installed lwt.5.9.2
-> installed pyml.20250807
-> installed batteries.3.10.0
-> installed line_oriented.1.3.0
-> installed bst.7.1.0
-> installed cpm.12.2.0
-> installed topkg.1.1.1
-> installed logs.0.10.0
-> installed ppxlib.0.37.0
-> installed camltc.0.9.8
-> installed extunix.0.4.4
-> installed dokeysto.4.0.2
-> installed dokeysto_camltc.4.0.2
-> installed molenc.16.13.0
-> installed svmwrap.4.0.0
Done.
<><> nlopt-ocaml.transition installed successfully ><><><><><><><><><><><><><><>
=> NLopt-ocaml has been renamed and the nlopt-ocaml package is now a transition package. Use the nlopt package instead.
# To update the current shell environment, run: eval $(opam env)
2025-12-15 15:33.09 ---> saved as "a3aa98b2bd795e867ba33c4f30592374f8ab7b0cae909062b2bffb2b7860a592"
/home/opam: (run (network host)
(shell "(opam reinstall --with-test svmwrap.4.0.0) || true"))
The following actions will be performed:
=== recompile 1 package
- recompile svmwrap 4.0.0
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved svmwrap.4.0.0 (https://opam.ocaml.org/cache)
-> removed svmwrap.4.0.0
-> installed svmwrap.4.0.0
Done.
# To update the current shell environment, run: eval $(opam env)
2025-12-15 15:33.13 ---> saved as "e24c6405f2110aceb75f0d3f331c3ad6d52f2886b3371105d238cd31131f9925"
/home/opam: (run (shell "opam reinstall --with-test --verbose svmwrap.4.0.0;\
\n res=$?;\
\n test \"$res\" != 31 && exit \"$res\";\
\n export OPAMCLI=2.0;\
\n build_dir=$(opam var prefix)/.opam-switch/build;\
\n failed=$(ls \"$build_dir\");\
\n partial_fails=\"\";\
\n for pkg in $failed; do\
\n if opam show -f x-ci-accept-failures: \"$pkg\" | grep -qF \"\\\"debian-13\\\"\"; then\
\n echo \"A package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\";\
\n fi;\
\n test \"$pkg\" != 'svmwrap.4.0.0' && partial_fails=\"$partial_fails $pkg\";\
\n done;\
\n test \"${partial_fails}\" != \"\" && echo \"opam-repo-ci detected dependencies failing: ${partial_fails}\";\
\n exit 1"))
The following actions will be performed:
=== recompile 1 package
- recompile svmwrap 4.0.0
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing 1/4: [svmwrap.4.0.0: extract]
-> retrieved svmwrap.4.0.0 (cached)
Processing 2/4: [svmwrap: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "svmwrap" "-j" "255" (CWD=/home/opam/.opam/4.14/.opam-switch/build/svmwrap.4.0.0)
-> compiled svmwrap.4.0.0
-> removed svmwrap.4.0.0
-> installed svmwrap.4.0.0
Done.
# To update the current shell environment, run: eval $(opam env)
2025-12-15 15:33.17 ---> saved as "a2261a5b289f0875a70002f0b792b17fb3ea997f62e0d1164484ab5ed9d4462b"
Job succeeded
2025-12-15 15:33.27: Job succeeded